Escherichia coli strain 2012C-42271

TA loci of Escherichia coli strain 2012C-4227

Number of TA loci: experimental0; insolico22

TA ID Related MGEs Organism (replicon) Genome accession Toxin Antitoxin Family/Domain
in_silico TA057761 Plasmid IScluster/Tn Escherichia coli strain 2012C-4227 (plasmid unnamed1) NZ_CP013028 AKK22_RS00130 (relE) AKK22_RS00135 (relB) relBE/ParE-YafN
in_silico TA057762 Plasmid Escherichia coli strain 2012C-4227 (plasmid unnamed1) NZ_CP013028 AKK22_RS00310 (relE) AKK22_RS00305 (relB) relBE/RHH(antitoxin)
in_silico TA057764 Prophage Escherichia coli strain 2012C-4227 (chromosome) NZ_CP013029 AKK22_RS04305 (yafQ) AKK22_RS04310 (dinJ) DinJ-YafQ (relBE)/YafQ-RelB
in_silico TA057765 - Escherichia coli strain 2012C-4227 (chromosome) NZ_CP013029 AKK22_RS05140 (itaT) AKK22_RS05145 (itaR) itaRT/DUF1778(antitoxin)
in_silico TA057766 - Escherichia coli strain 2012C-4227 (chromosome) NZ_CP013029 AKK22_RS05315 (Hha) AKK22_RS05320 (TomB) Hha-TomB/-
in_silico TA057767 ICE Escherichia coli strain 2012C-4227 (chromosome) NZ_CP013029 AKK22_RS08425 (parE_1) AKK22_RS08430 (paaA) paaR-paaA-parE/-
in_silico TA057768 Prophage Escherichia coli strain 2012C-4227 (chromosome) NZ_CP013029 AKK22_RS11485 (parE_1) AKK22_RS11490 (paaA) paaR-paaA-parE/-
in_silico TA057769 GI Escherichia coli strain 2012C-4227 (chromosome) NZ_CP013029 AKK22_RS11975 (hipA) AKK22_RS11970 (hipB) hipBA/HipA-HipB
in_silico TA057770 IS/Tn Escherichia coli strain 2012C-4227 (chromosome) NZ_CP013029 AKK22_RS12350 (hicA) AKK22_RS12345 (hicB) hicAB/UPF0150(antitoxin)
in_silico TA057779 - Escherichia coli strain 2012C-4227 (chromosome) NZ_CP013029 AKK22_RS16555 (yoeB) AKK22_RS16560 (yefM) yefM-yoeB (relBE)/YoeB-YefM
in_silico TA057780 - Escherichia coli strain 2012C-4227 (chromosome) NZ_CP013029 AKK22_RS18940 (vapC) AKK22_RS18945 (vapB) vapBC/VapC-VagC
in_silico TA057781 - Escherichia coli strain 2012C-4227 (chromosome) NZ_CP013029 AKK22_RS20060 (higB) AKK22_RS20055 (higA) higBA (relBE)/HigB-HigA
in_silico TA057782 - Escherichia coli strain 2012C-4227 (chromosome) NZ_CP013029 AKK22_RS20430 (mazF) AKK22_RS20435 (mazE) mazEF/PRK09907-MazE
in_silico TA057784 - Escherichia coli strain 2012C-4227 (chromosome) NZ_CP013029 AKK22_RS22320 (higB) AKK22_RS22315 (higA) higBA (relBE)/HigB-HigA
in_silico TA057785 GI Escherichia coli strain 2012C-4227 (chromosome) NZ_CP013029 AKK22_RS22580 (yhaV) AKK22_RS22575 (prlF) prlF-yhaV (relBE)/YhaV-PrlF
in_silico TA057787 Prophage Escherichia coli strain 2012C-4227 (chromosome) NZ_CP013029 AKK22_RS24045 (panT) AKK22_RS24050 (panA) PanAT/DUF4065(antitoxin)
in_silico TA057788 GI Escherichia coli strain 2012C-4227 (chromosome) NZ_CP013029 AKK22_RS27190 (hicA) AKK22_RS27195 (hicB) hicAB/-
in_silico TA057789 Plasmid Escherichia coli strain 2012C-4227 (plasmid unnamed2) NZ_CP013030 AKK22_RS27710 (doc) AKK22_RS27715 (phd) phd-doc/Doc-Phd
experimentalExperimentally validated     insolicoBioinformatically predicted