MGE detailed information
MGE type: Prophage MGE length: 104577 bp
Accession: NZ_CP013029 Location: 2003799..2108375 Organism: Escherichia coli strain 2012C-4227 Replicon: chromosome
Accession: NZ_CP013029 Location: 2003799..2108375 Organism: Escherichia coli strain 2012C-4227 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AKK22_RS11050 () | 1999355..2000143 | - | 789 | WP_000506490.1 | enoyl-ACP reductase FabI | - |
| AKK22_RS11060 () | 2000511..2000864 | - | 354 | WP_074433631.1 | DUF559 domain-containing protein | - |
| AKK22_RS11065 () | 2000932..2001738 | - | 807 | WP_000573407.1 | peptide ABC transporter ATP-binding protein SapF | - |
| AKK22_RS11070 () | 2001740..2002732 | - | 993 | WP_001128858.1 | peptide ABC transporter ATP-binding protein SapD | - |
| AKK22_RS11075 () | 2002732..2003622 | - | 891 | WP_001146163.1 | peptide ABC transporter permease SapC | - |
| AKK22_RS11080 () | 2003757..2004986 | + | 1230 | WP_047087715.1 | Prophage integrase IntA ; Integrase | Integrase |
| AKK22_RS29200 () | 2004950..2005192 | - | 243 | WP_001563185.1 | hypothetical protein | - |
| AKK22_RS11085 () | 2005246..2005486 | - | 241 | Protein_2003 | DUF4222 domain-containing protein | - |
| AKK22_RS29205 () | 2005474..2005707 | - | 234 | WP_021351637.1 | hypothetical protein | - |
| AKK22_RS11090 () | 2005851..2006231 | - | 381 | WP_000994793.1 | DUF1627 domain-containing protein | - |
| AKK22_RS11095 () | 2006267..2006479 | - | 213 | WP_001291843.1 | DUF1382 family protein | - |
| AKK22_RS11100 () | 2006439..2007065 | - | 627 | WP_032206818.1 | adenine methylase | - |
| AKK22_RS11105 () | 2007062..2007493 | - | 432 | WP_000809302.1 | hypothetical protein | - |
| AKK22_RS11110 () | 2007549..2008226 | - | 678 | WP_000211992.1 | ORF6N domain-containing protein | - |
| AKK22_RS11115 () | 2008551..2008808 | + | 258 | WP_001260979.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| AKK22_RS11120 () | 2008937..2009134 | + | 198 | WP_001451755.1 | hypothetical protein | - |
| AKK22_RS29220 () | 2009224..2009529 | + | 306 | WP_001302866.1 | HigA family addiction module antidote protein | - |
| AKK22_RS11130 () | 2009572..2010136 | - | 565 | Protein_2013 | hypothetical protein | - |
| AKK22_RS32835 () | 2010129..2010305 | - | 177 | WP_001304084.1 | hypothetical protein | - |
| AKK22_RS11135 () | 2010399..2011022 | - | 624 | WP_000206752.1 | DUF551 domain-containing protein | - |
| AKK22_RS11140 () | 2011026..2011313 | - | 288 | WP_000212746.1 | hypothetical protein | - |
| AKK22_RS11145 () | 2011315..2011533 | - | 219 | WP_001142590.1 | DUF4014 family protein | - |
| AKK22_RS29225 () | 2011535..2011750 | - | 216 | WP_032206820.1 | hypothetical protein | - |
| AKK22_RS11150 () | 2011710..2012216 | - | 507 | WP_001301469.1 | hypothetical protein | - |
| AKK22_RS11155 () | 2012218..2013165 | - | 948 | WP_001303141.1 | ead/Ea22-like family protein | - |
| AKK22_RS11165 () | 2013389..2013592 | - | 204 | WP_000157000.1 | hypothetical protein | - |
| AKK22_RS30955 () | 2013806..2015018 | + | 1213 | Protein_2022 | IS3 family transposase IS629 | Transposase |
| AKK22_RS11190 () | 2015107..2015751 | - | 645 | Protein_2023 | recombinase RecT | - |
| AKK22_RS11195 () | 2015769..2016050 | - | 282 | WP_000995345.1 | host nuclease inhibitor GamL | - |
| AKK22_RS11200 () | 2016071..2016352 | - | 282 | WP_000934197.1 | hypothetical protein | - |
| AKK22_RS11205 () | 2016364..2016576 | - | 213 | WP_000917252.1 | cell division inhibitor protein | - |
| AKK22_RS11210 () | 2016647..2017543 | - | 897 | WP_071887479.1 | Rha family phage regulatory protein | - |
| AKK22_RS11215 () | 2018046..2018999 | - | 954 | WP_032207145.1 | restriction endonuclease BsuBI | - |
| AKK22_RS11220 () | 2018996..2020465 | - | 1470 | WP_032207143.1 | Eco57I restriction-modification methylase domain-containing protein | - |
| AKK22_RS11225 () | 2020560..2021273 | - | 714 | WP_001056250.1 | LexA family transcriptional regulator | - |
| AKK22_RS11230 () | 2021369..2021572 | + | 204 | WP_001240876.1 | Cro/Cl family transcriptional regulator | - |
| AKK22_RS30960 () | 2021743..2021937 | + | 195 | WP_077744819.1 | hypothetical protein | - |
| AKK22_RS11240 () | 2022104..2022481 | + | 378 | WP_032207142.1 | hypothetical protein | - |
| AKK22_RS11245 () | 2022475..2023995 | + | 1521 | WP_000913117.1 | DEAD/DEAH box helicase | - |
| AKK22_RS11250 () | 2023985..2024926 | + | 942 | WP_060552848.1 | toprim domain-containing protein | - |
| AKK22_RS11255 () | 2024955..2025404 | + | 450 | WP_000402090.1 | DUF1367 family protein | - |
| AKK22_RS11260 () | 2025412..2025975 | + | 564 | WP_001187434.1 | recombination protein NinG | - |
| AKK22_RS11265 () | 2025972..2026166 | + | 195 | WP_000144764.1 | phage NinH family protein | - |
| AKK22_RS11270 () | 2026159..2026593 | + | 435 | WP_001204844.1 | antitermination protein | - |
| AKK22_RS29245 () | 2026842..2026994 | + | 153 | WP_001356551.1 | DNA methylase | - |
| AKK22_RS11290 () | 2027377..2028336 | + | 960 | WP_000649753.1 | Shiga toxin subunit A | VF |
| AKK22_RS11295 () | 2028348..2028617 | + | 270 | WP_000738068.1 | Shiga toxin subunit B | VF |
| AKK22_RS11300 () | 2029103..2031040 | + | 1938 | Protein_2043 | DUF1737 domain-containing protein | - |
| AKK22_RS11305 () | 2031177..2031356 | + | 180 | WP_000143458.1 | DUF1378 family protein | - |
| AKK22_RS11310 () | 2031397..2031642 | + | 246 | WP_001290230.1 | DUF826 domain-containing protein | - |
| AKK22_RS11315 () | 2031720..2031935 | + | 216 | WP_001072901.1 | class II holin family protein | - |
| AKK22_RS11320 () | 2031940..2032473 | + | 534 | WP_047618934.1 | lysozyme | - |
| AKK22_RS11325 () | 2032748..2033317 | + | 570 | WP_001056885.1 | hypothetical protein | - |
| AKK22_RS31950 () | 2033317..2033466 | + | 150 | WP_000455406.1 | hypothetical protein | - |
| AKK22_RS11335 () | 2033474..2033938 | + | 465 | WP_001082654.1 | lysis protein | - |
| AKK22_RS11340 () | 2033970..2034263 | - | 294 | WP_000738505.1 | serum resistance lipoprotein Bor | - |
| AKK22_RS29255 () | 2034413..2034616 | + | 204 | WP_001301714.1 | hypothetical protein | - |
| AKK22_RS11345 () | 2034672..2034848 | + | 177 | Protein_2053 | terminase | - |
| AKK22_RS11360 () | 2036159..2036692 | + | 534 | Protein_2055 | IS3 family transposase ISSd1 | Transposase |
| AKK22_RS11365 () | 2036737..2036904 | + | 168 | Protein_2056 | Ig-like domain-containing protein | - |
| AKK22_RS11370 () | 2036918..2037349 | + | 432 | WP_000479105.1 | phage minor tail protein G | - |
| AKK22_RS11375 () | 2037376..2037780 | + | 405 | WP_044861160.1 | phage tail assembly protein T | - |
| AKK22_RS32840 () | 2037761..2038963 | + | 1203 | WP_200924008.1 | phage tail tape measure protein | - |
| AKK22_RS32845 () | 2039095..2040339 | + | 1245 | Protein_2060 | phage tail tape measure protein | - |
| AKK22_RS11385 () | 2040336..2040665 | + | 330 | WP_032206995.1 | phage tail protein | - |
| AKK22_RS11390 () | 2040665..2041363 | + | 699 | WP_060552849.1 | phage minor tail protein L | - |
| AKK22_RS11395 () | 2041369..2042112 | + | 744 | WP_060552850.1 | C40 family peptidase | - |
| AKK22_RS11400 () | 2042058..2042690 | + | 633 | WP_123007084.1 | tail assembly protein | - |
| AKK22_RS11405 () | 2042936..2046412 | + | 3477 | WP_060552852.1 | host specificity protein J | - |
| AKK22_RS11410 () | 2046479..2047078 | + | 600 | WP_001230532.1 | Outer membrane protein X | VF |
| AKK22_RS11415 () | 2047143..2048726 | + | 1584 | WP_129014758.1 | ISNCY family transposase KIS | Transposase |
| AKK22_RS11425 () | 2048841..2049416 | + | 576 | WP_001131658.1 | hypothetical protein | VF |
| AKK22_RS30975 () | 2049489..2050118 | + | 630 | WP_078164217.1 | hypothetical protein | VF |
| AKK22_RS11435 () | 2050200..2050841 | + | 642 | WP_001143804.1 | hypothetical protein | VF |
| AKK22_RS11440 () | 2051014..2052309 | - | 1296 | WP_001206148.1 | Putative defective protein IntQ ; Integrase | Integrase |
| AKK22_RS11445 () | 2052329..2052580 | - | 252 | WP_000005551.1 | excisionase family protein | - |
| AKK22_RS11450 () | 2052653..2055115 | - | 2463 | WP_060552853.1 | exonuclease | - |
| AKK22_RS11455 () | 2055208..2055396 | - | 189 | WP_000199475.1 | DUF1482 family protein | - |
| AKK22_RS11460 () | 2055393..2055581 | - | 189 | WP_000449175.1 | cell division inhibitor | - |
| AKK22_RS11470 () | 2056145..2056354 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| AKK22_RS11475 () | 2056355..2056993 | - | 639 | WP_001473525.1 | hypothetical protein | - |
| AKK22_RS11480 () | 2057005..2057157 | - | 153 | WP_000379546.1 | DUF1391 family protein | - |
| AKK22_RS11485 () | 2057429..2057716 | - | 288 | WP_001444087.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AKK22_RS11490 () | 2057720..2057908 | - | 189 | WP_001090455.1 | hypothetical protein | Antitoxin Detail |
| AKK22_RS11495 () | 2057938..2058336 | - | 399 | WP_000209117.1 | helix-turn-helix domain-containing protein | - |
| AKK22_RS29270 () | 2058453..2058731 | + | 279 | WP_000548554.1 | helix-turn-helix domain-containing protein | - |
| AKK22_RS11500 () | 2058715..2059236 | + | 522 | WP_000705386.1 | hypothetical protein | - |
| AKK22_RS11505 () | 2059217..2060194 | + | 978 | WP_000054521.1 | hypothetical protein | - |
| AKK22_RS11510 () | 2060201..2060941 | + | 741 | WP_000790460.1 | ATP-binding protein | - |
| AKK22_RS11515 () | 2060971..2061741 | + | 771 | WP_009453174.1 | DUF1627 domain-containing protein | - |
| AKK22_RS11520 () | 2061757..2062152 | + | 396 | WP_001473635.1 | DUF977 family protein | - |
| AKK22_RS11525 () | 2062210..2062566 | + | 357 | WP_009453172.1 | hypothetical protein | - |
| AKK22_RS11530 () | 2062617..2062829 | + | 213 | WP_000935420.1 | hypothetical protein | - |
| AKK22_RS11535 () | 2063059..2063247 | + | 189 | WP_044862496.1 | hypothetical protein | - |
| AKK22_RS11540 () | 2063249..2063458 | + | 210 | WP_000951710.1 | hypothetical protein | - |
| AKK22_RS11545 () | 2063455..2064090 | + | 636 | WP_001473452.1 | DUF551 domain-containing protein | - |
| AKK22_RS30980 () | 2064206..2064310 | + | 105 | WP_001278454.1 | hypothetical protein | - |
| AKK22_RS11550 () | 2064557..2064712 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| AKK22_RS11555 () | 2064856..2065248 | + | 393 | WP_000737636.1 | hypothetical protein | - |
| AKK22_RS11560 () | 2065545..2065823 | + | 279 | WP_001473246.1 | hypothetical protein | - |
| AKK22_RS11565 () | 2065825..2066874 | + | 1050 | WP_001375683.1 | DUF968 domain-containing protein | - |
| AKK22_RS11570 () | 2066888..2067640 | + | 753 | WP_001047111.1 | antitermination protein | - |
| AKK22_RS11590 () | 2068485..2068709 | + | 225 | WP_000735807.1 | hypothetical protein | - |
| AKK22_RS11595 () | 2068762..2068971 | + | 210 | WP_000498121.1 | hypothetical protein | - |
| AKK22_RS11600 () | 2069161..2069592 | + | 432 | WP_001299632.1 | tellurite resistance protein | - |
| AKK22_RS11605 () | 2069589..2069844 | + | 256 | Protein_2102 | DUF3927 family protein | - |
| AKK22_RS11615 () | 2070071..2071924 | + | 1854 | WP_060552855.1 | SASA family carbohydrate esterase | - |
| AKK22_RS11620 () | 2072074..2072289 | + | 216 | WP_000284516.1 | class II holin family protein | - |
| AKK22_RS11625 () | 2072293..2072850 | + | 558 | WP_024231374.1 | hypothetical protein | - |
| AKK22_RS11630 () | 2072893..2073426 | + | 534 | WP_001092861.1 | lysozyme | - |
| AKK22_RS11635 () | 2073725..2074192 | + | 468 | WP_001082561.1 | lysis protein | - |
| AKK22_RS11640 () | 2074543..2074683 | + | 141 | WP_000347013.1 | hypothetical protein | - |
| AKK22_RS11645 () | 2074816..2075001 | - | 186 | WP_001329960.1 | YlcI/YnfO family protein | - |
| AKK22_RS11655 () | 2075390..2075935 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| AKK22_RS11660 () | 2075910..2077835 | + | 1926 | WP_001027330.1 | phage terminase large subunit family protein | - |
| AKK22_RS11665 () | 2077832..2078038 | + | 207 | WP_000198153.1 | gpW family protein | - |
| AKK22_RS11670 () | 2078035..2079636 | + | 1602 | WP_024026143.1 | phage portal protein | - |
| AKK22_RS11675 () | 2079617..2080936 | + | 1320 | WP_000123254.1 | S49 family peptidase | - |
| AKK22_RS11680 () | 2080946..2081278 | + | 333 | WP_001365129.1 | head decoration protein | - |
| AKK22_RS11685 () | 2081334..2082359 | + | 1026 | WP_000063258.1 | major capsid protein | - |
| AKK22_RS11690 () | 2082401..2082796 | + | 396 | WP_022581670.1 | DNA-packaging protein FI | - |
| AKK22_RS11695 () | 2082808..2083161 | + | 354 | WP_000752994.1 | head-tail joining protein | - |
| AKK22_RS11700 () | 2083173..2083751 | + | 579 | WP_000975098.1 | phage tail protein | - |
| AKK22_RS11705 () | 2083748..2084143 | + | 396 | WP_000683137.1 | phage minor tail U family protein | - |
| AKK22_RS11710 () | 2084151..2084903 | + | 753 | WP_000235067.1 | Ig domain-containing protein | - |
| AKK22_RS11715 () | 2084917..2085339 | + | 423 | WP_000479045.1 | phage minor tail protein G | - |
| AKK22_RS11720 () | 2085366..2085779 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| AKK22_RS11725 () | 2085760..2088372 | + | 2613 | WP_060552857.1 | phage tail tape measure protein | - |
| AKK22_RS11730 () | 2088369..2088698 | + | 330 | WP_000847298.1 | phage tail protein | - |
| AKK22_RS11735 () | 2088698..2089396 | + | 699 | WP_060552858.1 | phage minor tail protein L | - |
| AKK22_RS11740 () | 2089407..2090150 | + | 744 | WP_000194723.1 | C40 family peptidase | - |
| AKK22_RS11745 () | 2090096..2090728 | + | 633 | WP_129014765.1 | tail assembly protein | - |
| AKK22_RS11750 () | 2090975..2094451 | + | 3477 | WP_060552860.1 | host specificity protein J | - |
| AKK22_RS11755 () | 2094518..2095117 | + | 600 | WP_032325332.1 | Attachment invasion locus protein | VF |
| AKK22_RS11760 () | 2095182..2096495 | + | 1314 | WP_000279047.1 | ISNCY family transposase KIS | Transposase |
| AKK22_RS11765 () | 2096497..2096766 | + | 270 | WP_001101700.1 | phage tail fiber C-terminal domain-containing protein | - |
| AKK22_RS11770 () | 2097169..2098182 | + | 1014 | WP_122993102.1 | hypothetical protein | VF |
| AKK22_RS11775 () | 2098553..2098795 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| AKK22_RS11780 () | 2098927..2100210 | + | 1284 | Protein_2135 | MHS family MFS transporter YdfJ | - |
| AKK22_RS11785 () | 2100299..2101759 | + | 1461 | WP_000527756.1 | mannitol dehydrogenase family protein | - |
| AKK22_RS11790 () | 2101795..2101998 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| AKK22_RS11795 () | 2102176..2102862 | - | 687 | WP_032208665.1 | DNA-binding transcriptional regulator YdfH | - |
| AKK22_RS11800 () | 2102951..2103697 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| AKK22_RS11805 () | 2103834..2105879 | + | 2046 | WP_032208663.1 | peptidyl-dipeptidase Dcp | - |
| AKK22_RS11810 () | 2105923..2106468 | - | 546 | WP_032208661.1 | 2-oxo-tetronate isomerase | - |
| AKK22_RS11825 () | 2107983..2108375 | + | 393 | WP_000671731.1 | YdeI family stress tolerance OB fold protein | - |
| AKK22_RS11830 () | 2108630..2109520 | + | 891 | WP_000592822.1 | diguanylate cyclase DgcZ | - |
| AKK22_RS32990 () | 2109635..2109739 | - | 105 | WP_211180496.1 | protein MgtT | - |
| AKK22_RS11835 () | 2109739..2109834 | - | 96 | WP_000901367.1 | protein MgtS | - |
| AKK22_RS29305 () | 2109961..2110086 | - | 126 | Protein_2147 | efflux MFS transporter YdeE | - |
| AKK22_RS11840 () | 2110344..2111243 | + | 900 | WP_000087214.1 | O-acetylserine/cysteine exporter | - |
| AKK22_RS11845 () | 2111274..2111492 | - | 219 | WP_000803659.1 | multiple antibiotic resistance protein MarB | - |
| AKK22_RS11850 () | 2111524..2111907 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| AKK22_RS11855 () | 2111927..2112361 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| AKK22_RS11860 () | 2112573..2113238 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|