MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 45546 bp
Accession: NZ_CP013029 Location: 1547242..1592787 Organism: Escherichia coli strain 2012C-4227 Replicon: chromosome
Accession: NZ_CP013029 Location: 1547242..1592787 Organism: Escherichia coli strain 2012C-4227 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AKK22_RS08345 () | 1542733..1543395 | - | 663 | WP_000847791.1 | DUF2057 family protein | - |
| AKK22_RS08355 () | 1543568..1543981 | + | 414 | WP_001343235.1 | CoA-binding protein | - |
| AKK22_RS08360 () | 1544026..1544343 | - | 318 | WP_001295356.1 | heat shock protein HspQ | - |
| AKK22_RS08365 () | 1544401..1545591 | - | 1191 | WP_032206204.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
| AKK22_RS08370 () | 1545686..1545964 | + | 279 | WP_000048252.1 | acylphosphatase | - |
| AKK22_RS08375 () | 1545961..1546290 | - | 330 | WP_000904442.1 | sulfurtransferase TusE | - |
| AKK22_RS08380 () | 1546381..1547040 | - | 660 | WP_000375138.1 | FtsH protease modulator YccA | - |
| AKK22_RS08390 () | 1547448..1548257 | - | 810 | WP_032206255.1 | hypothetical protein ; Integrase | Integrase |
| AKK22_RS08395 () | 1548445..1548687 | - | 243 | WP_000273151.1 | DUF4224 domain-containing protein | - |
| AKK22_RS08400 () | 1548755..1551229 | - | 2475 | WP_032206202.1 | exonuclease | - |
| AKK22_RS08405 () | 1551323..1551514 | - | 192 | WP_001098307.1 | DUF1482 family protein | - |
| AKK22_RS08410 () | 1551511..1551699 | - | 189 | WP_000413705.1 | cell division inhibition protein DicB | - |
| AKK22_RS08415 () | 1552412..1552858 | + | 447 | WP_000373334.1 | hypothetical protein | - |
| AKK22_RS08420 () | 1552957..1553109 | - | 153 | WP_000367377.1 | DUF1391 family protein | - |
| AKK22_RS08425 () | 1553384..1553674 | - | 291 | WP_021568727.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AKK22_RS08430 () | 1553674..1553865 | - | 192 | WP_000108762.1 | hypothetical protein | Antitoxin Detail |
| AKK22_RS08435 () | 1553883..1554383 | - | 501 | WP_021568728.1 | helix-turn-helix transcriptional regulator | - |
| AKK22_RS08440 () | 1554491..1554754 | + | 264 | WP_001048459.1 | helix-turn-helix domain-containing protein | - |
| AKK22_RS08445 () | 1554751..1555176 | + | 426 | WP_000693918.1 | Rha family transcriptional regulator | - |
| AKK22_RS08450 () | 1555248..1556318 | + | 1071 | WP_001262367.1 | hypothetical protein | - |
| AKK22_RS08455 () | 1556359..1556781 | + | 423 | WP_032206198.1 | DUF977 family protein | - |
| AKK22_RS08460 () | 1556839..1557198 | + | 360 | WP_032206196.1 | hypothetical protein | - |
| AKK22_RS08465 () | 1557244..1557456 | + | 213 | WP_032206194.1 | hypothetical protein | - |
| AKK22_RS08470 () | 1557492..1558325 | + | 834 | WP_032206192.1 | hypothetical protein | - |
| AKK22_RS30825 () | 1558435..1558539 | + | 105 | WP_001278459.1 | hypothetical protein | - |
| AKK22_RS08475 () | 1558784..1558939 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| AKK22_RS08480 () | 1559184..1559543 | + | 360 | WP_001219082.1 | helix-turn-helix domain-containing protein | - |
| AKK22_RS08485 () | 1559546..1560022 | + | 477 | WP_000284536.1 | ImmA/IrrE family metallo-endopeptidase | - |
| AKK22_RS30830 () | 1560455..1560733 | + | 279 | WP_032207160.1 | hypothetical protein | - |
| AKK22_RS08495 () | 1560735..1561793 | + | 1059 | WP_032207158.1 | DUF968 domain-containing protein | - |
| AKK22_RS08500 () | 1561794..1562174 | + | 381 | WP_032207155.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AKK22_RS08505 () | 1562171..1562992 | + | 822 | WP_000762928.1 | antitermination protein | - |
| AKK22_RS08510 () | 1563230..1563592 | + | 363 | Protein_1512 | tellurite resistance TerB family protein | - |
| AKK22_RS31800 () | 1563589..1563720 | + | 132 | WP_001344632.1 | DUF3927 family protein | - |
| AKK22_RS08515 () | 1564163..1566013 | + | 1851 | WP_053888468.1 | SASA family carbohydrate esterase | - |
| AKK22_RS08525 () | 1566450..1566665 | + | 216 | WP_053897820.1 | class II holin family protein | - |
| AKK22_RS08535 () | 1566921..1567193 | - | 273 | WP_000138558.1 | hypothetical protein | - |
| AKK22_RS08540 () | 1567353..1567886 | + | 534 | WP_001003118.1 | lysozyme | - |
| AKK22_RS08545 () | 1568107..1568220 | + | 114 | WP_000675931.1 | hypothetical protein | - |
| AKK22_RS31810 () | 1568442..1568627 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| AKK22_RS08555 () | 1569155..1569469 | + | 315 | WP_001303878.1 | PerC family transcriptional regulator | - |
| AKK22_RS28925 () | 1569551..1569775 | - | 225 | WP_001300236.1 | YlcI/YnfO family protein | - |
| AKK22_RS08565 () | 1570178..1570687 | + | 510 | WP_000235436.1 | terminase small subunit | - |
| AKK22_RS08570 () | 1570659..1572587 | + | 1929 | WP_032207005.1 | phage terminase large subunit family protein | - |
| AKK22_RS08575 () | 1572571..1572777 | + | 207 | WP_000258991.1 | gpW family protein | - |
| AKK22_RS08580 () | 1572774..1574366 | + | 1593 | WP_001430223.1 | phage portal protein | - |
| AKK22_RS08585 () | 1574356..1575861 | + | 1506 | WP_001254039.1 | S49 family peptidase | - |
| AKK22_RS08590 () | 1575898..1576245 | + | 348 | WP_000256818.1 | head decoration protein | - |
| AKK22_RS08595 () | 1576303..1577331 | + | 1029 | WP_000522630.1 | major capsid protein | - |
| AKK22_RS08600 () | 1577383..1577757 | + | 375 | WP_000201528.1 | hypothetical protein | - |
| AKK22_RS08605 () | 1577750..1578103 | + | 354 | WP_001204544.1 | tail attachment protein | - |
| AKK22_RS08610 () | 1578118..1578693 | + | 576 | WP_032207006.1 | phage tail protein | - |
| AKK22_RS08615 () | 1578690..1579085 | + | 396 | WP_032207007.1 | phage minor tail U family protein | - |
| AKK22_RS08620 () | 1579093..1579833 | + | 741 | WP_001342267.1 | phage tail protein | - |
| AKK22_RS08625 () | 1579849..1580271 | + | 423 | WP_000479169.1 | phage minor tail protein G | - |
| AKK22_RS08630 () | 1580253..1580687 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| AKK22_RS08635 () | 1580680..1583241 | + | 2562 | Protein_1536 | phage tail tape measure protein | - |
| AKK22_RS08640 () | 1583238..1583567 | + | 330 | WP_000847347.1 | phage tail protein | - |
| AKK22_RS08645 () | 1583567..1584265 | + | 699 | WP_032207009.1 | phage minor tail protein L | - |
| AKK22_RS08650 () | 1584271..1585014 | + | 744 | WP_032207010.1 | C40 family peptidase | - |
| AKK22_RS08655 () | 1584951..1585583 | + | 633 | WP_071887464.1 | tail assembly protein | - |
| AKK22_RS08660 () | 1585644..1589039 | + | 3396 | WP_032207011.1 | host specificity protein J | - |
| AKK22_RS08665 () | 1589107..1589706 | + | 600 | WP_047617645.1 | Outer membrane protein X | VF |
| AKK22_RS08670 () | 1589771..1590976 | + | 1206 | WP_060552821.1 | prophage tail fiber N-terminal domain-containing protein | - |
| AKK22_RS08675 () | 1590978..1591247 | + | 270 | WP_001023379.1 | phage tail fiber C-terminal domain-containing protein | - |
| AKK22_RS28930 () | 1591373..1592125 | - | 753 | WP_047618562.1 | Secreted effector protein EspF(U) | VF |
| AKK22_RS08695 () | 1593242..1594360 | + | 1119 | WP_001058323.1 | hydrogenase 1 small subunit | - |
| AKK22_RS08700 () | 1594357..1596150 | + | 1794 | WP_000107384.1 | Ni/Fe-hydrogenase large subunit | - |
| AKK22_RS08705 () | 1596169..1596876 | + | 708 | WP_001186424.1 | Ni/Fe-hydrogenase b-type cytochrome subunit | - |
| AKK22_RS08710 () | 1596873..1597460 | + | 588 | WP_000003671.1 | hydrogenase 1 maturation protease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|