MGE detailed information
MGE type: Genomic_island MGE length: 80907 bp
Accession: NZ_CP010812 Location: 737949..818855 Organism: Vibrio cholerae strain 10432-62 Replicon: chromosome
Accession: NZ_CP010812 Location: 737949..818855 Organism: Vibrio cholerae strain 10432-62 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VAB027_RS03295 () | 733416..736191 | - | 2776 | Protein_626 | alkaline phosphatase family protein | - |
| VAB027_RS03300 () | 736716..737116 | - | 401 | Protein_627 | type II toxin-antitoxin system death-on-curing family toxin | - |
| VAB027_RS03305 () | 737116..737286 | - | 171 | WP_046126162.1 | hypothetical protein | - |
| VAB027_RS03310 () | 737487..737831 | - | 345 | WP_046126163.1 | superinfection immunity protein | - |
| VAB027_RS03315 () | 737949..738869 | - | 921 | WP_001896359.1 | IS5 family transposase ISVch8 | Transposase |
| VAB027_RS03320 () | 738970..739527 | + | 558 | WP_046126164.1 | hypothetical protein | - |
| VAB027_RS19155 () | 739584..739697 | + | 114 | WP_080341667.1 | acetyltransferase | - |
| VAB027_RS19160 () | 739646..739927 | + | 282 | WP_080284439.1 | DUF1289 domain-containing protein | - |
| VAB027_RS03330 () | 740793..741713 | + | 921 | WP_001896359.1 | IS5 family transposase ISVch8 | Transposase |
| VAB027_RS03340 () | 742130..743134 | - | 1005 | WP_046126167.1 | LD-carboxypeptidase | - |
| VAB027_RS03345 () | 743302..743589 | - | 288 | WP_017049660.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VAB027_RS03350 () | 743586..743867 | - | 282 | WP_000086650.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VAB027_RS03355 () | 744095..744523 | - | 429 | WP_000074666.1 | hypothetical protein | - |
| VAB027_RS03360 () | 744507..745439 | - | 933 | WP_046126168.1 | hypothetical protein | - |
| VAB027_RS03365 () | 745768..746052 | + | 285 | WP_000381183.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| VAB027_RS03370 () | 746049..746327 | + | 279 | WP_000578471.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| VAB027_RS03375 () | 746467..747321 | - | 855 | WP_142741583.1 | aminoglycoside phosphotransferase family protein | - |
| VAB027_RS03380 () | 747378..748040 | - | 663 | WP_076008610.1 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase | VF |
| VAB027_RS03385 () | 748173..748730 | - | 558 | Protein_644 | nucleotidyltransferase domain-containing protein | - |
| VAB027_RS03390 () | 749098..749343 | + | 246 | WP_001260801.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| VAB027_RS03395 () | 749343..749660 | + | 318 | WP_000077272.1 | CcdB family protein | - |
| VAB027_RS20325 () | 749601..749720 | - | 120 | WP_114780049.1 | acetyltransferase | - |
| VAB027_RS03400 () | 749777..750274 | - | 498 | WP_046126169.1 | GNAT family N-acetyltransferase | - |
| VAB027_RS03405 () | 750477..750659 | - | 183 | WP_009355233.1 | DUF645 family protein | - |
| VAB027_RS03410 () | 750939..751676 | - | 738 | WP_200894331.1 | 5'-nucleotidase | - |
| VAB027_RS03415 () | 751734..752654 | + | 921 | WP_001896359.1 | IS5 family transposase ISVch8 | Transposase |
| VAB027_RS19190 () | 752694..752939 | - | 246 | WP_080341669.1 | 5'-nucleotidase | - |
| VAB027_RS20230 () | 753367..753474 | - | 108 | WP_080341671.1 | acetyltransferase | Antitoxin Detail |
| VAB027_RS03425 () | 753554..753817 | - | 264 | WP_000098716.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| VAB027_RS03430 () | 753810..754064 | - | 255 | WP_001223794.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| VAB027_RS03435 () | 754274..754756 | - | 483 | WP_001900268.1 | hypothetical protein | - |
| VAB027_RS03440 () | 754797..755819 | - | 1023 | WP_046126171.1 | hypothetical protein | - |
| VAB027_RS03445 () | 756053..756466 | - | 414 | WP_046126172.1 | VOC family protein | - |
| VAB027_RS19210 () | 757243..757479 | - | 237 | WP_080007264.1 | DUF3709 domain-containing protein | - |
| VAB027_RS03450 () | 757581..757916 | - | 336 | WP_019829648.1 | hypothetical protein | - |
| VAB027_RS03455 () | 758056..758457 | - | 402 | WP_046126173.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| VAB027_RS03460 () | 758457..758627 | - | 171 | WP_046127315.1 | hypothetical protein | Antitoxin Detail |
| VAB027_RS03465 () | 758818..759231 | - | 414 | Protein_663 | hypothetical protein | - |
| VAB027_RS03470 () | 759311..760231 | + | 921 | WP_001896359.1 | IS5 family transposase ISVch8 | Transposase |
| VAB027_RS03475 () | 760240..760434 | - | 195 | WP_046126175.1 | hypothetical protein | - |
| VAB027_RS20235 () | 760484..760570 | - | 87 | WP_167335580.1 | acetyltransferase | - |
| VAB027_RS03480 () | 760627..761130 | - | 504 | WP_046126176.1 | DinB family protein | - |
| VAB027_RS03485 () | 761358..761528 | - | 171 | WP_032473200.1 | DUF645 family protein | - |
| VAB027_RS03490 () | 761857..762093 | - | 237 | WP_046126177.1 | hypothetical protein | - |
| VAB027_RS03495 () | 762348..762743 | - | 396 | WP_046126178.1 | DUF3465 domain-containing protein | - |
| VAB027_RS20330 () | 762758..762841 | - | 84 | WP_200894332.1 | iron transporter | - |
| VAB027_RS03500 () | 762918..763331 | - | 414 | WP_000451552.1 | GNAT family N-acetyltransferase | - |
| VAB027_RS03505 () | 763489..763965 | - | 477 | WP_046126179.1 | GNAT family N-acetyltransferase | - |
| VAB027_RS03510 () | 764102..764842 | - | 741 | Protein_674 | PhzF family phenazine biosynthesis protein | - |
| VAB027_RS03515 () | 765140..765418 | - | 279 | WP_046126180.1 | DUF3709 domain-containing protein | - |
| VAB027_RS03520 () | 765646..766128 | - | 483 | WP_046126181.1 | GNAT family N-acetyltransferase | - |
| VAB027_RS03525 () | 766273..766650 | - | 378 | WP_046126182.1 | hypothetical protein | - |
| VAB027_RS19255 () | 766866..767042 | - | 177 | Protein_678 | DUF645 family protein | - |
| VAB027_RS03530 () | 767402..767581 | - | 180 | WP_162484547.1 | DUF645 family protein | - |
| VAB027_RS03540 () | 767973..768215 | + | 243 | WP_000557291.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VAB027_RS03545 () | 768234..768551 | + | 318 | WP_046126185.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VAB027_RS20140 () | 768687..768971 | - | 285 | WP_046126186.1 | HEAT repeat domain-containing protein | - |
| VAB027_RS03555 () | 769196..769582 | - | 387 | WP_001015864.1 | NUDIX hydrolase | - |
| VAB027_RS03560 () | 769748..770086 | - | 339 | WP_046127316.1 | hypothetical protein | - |
| VAB027_RS03565 () | 770306..770548 | + | 243 | WP_001107719.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| VAB027_RS03570 () | 770545..770844 | + | 300 | WP_000802136.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VAB027_RS03575 () | 770967..771881 | - | 915 | WP_046126187.1 | hypothetical protein | - |
| VAB027_RS03580 () | 772057..772359 | - | 303 | WP_046126188.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VAB027_RS03585 () | 772347..772604 | - | 258 | WP_046126189.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VAB027_RS03590 () | 772795..773271 | - | 477 | WP_080341680.1 | hypothetical protein | - |
| VAB027_RS03595 () | 773444..773680 | + | 237 | WP_046126190.1 | RNA-binding protein | - |
| VAB027_RS03600 () | 773866..774279 | - | 414 | WP_046126191.1 | VOC family protein | - |
| VAB027_RS03605 () | 775028..775549 | - | 522 | WP_080341682.1 | hypothetical protein | - |
| VAB027_RS03610 () | 775705..776100 | - | 396 | WP_032473749.1 | DUF3465 domain-containing protein | - |
| VAB027_RS03615 () | 776708..777316 | - | 609 | WP_046126193.1 | hypothetical protein | - |
| VAB027_RS03620 () | 777533..777778 | - | 246 | WP_000643598.1 | hypothetical protein | Antitoxin Detail |
| VAB027_RS03625 () | 777765..778031 | - | 267 | WP_000589156.1 | BrnT family toxin | Toxin Detail |
| VAB027_RS03635 () | 778695..779654 | + | 960 | WP_001898459.1 | IS30 family transposase ISVvu6 | Transposase |
| VAB027_RS03640 () | 779685..780134 | - | 450 | WP_046126195.1 | GyrI-like domain-containing protein | - |
| VAB027_RS03645 () | 780271..780807 | - | 537 | WP_046126196.1 | nucleotidyltransferase family protein | - |
| VAB027_RS03660 () | 781051..781272 | - | 222 | WP_046126197.1 | DUF1289 domain-containing protein | - |
| VAB027_RS19295 () | 781342..781467 | - | 126 | WP_142741462.1 | DUF3265 domain-containing protein | - |
| VAB027_RS03665 () | 781476..781847 | - | 372 | WP_046126198.1 | DUF4440 domain-containing protein | - |
| VAB027_RS03670 () | 781994..782482 | - | 489 | WP_046126199.1 | GNAT family N-acetyltransferase | - |
| VAB027_RS03675 () | 782614..782961 | - | 348 | WP_000933405.1 | hypothetical protein | - |
| VAB027_RS03680 () | 783124..783486 | - | 363 | WP_162484548.1 | DUF4144 domain-containing protein | - |
| VAB027_RS19855 () | 783678..783815 | - | 138 | WP_000757220.1 | YHYH domain-containing protein | - |
| VAB027_RS20145 () | 784080..784118 | - | 39 | WP_108244118.1 | hypothetical protein | - |
| VAB027_RS19860 () | 784134..784261 | - | 128 | Protein_709 | DUF645 family protein | - |
| VAB027_RS03685 () | 784555..784869 | - | 315 | WP_000071008.1 | DNA-binding transcriptional regulator | Antitoxin Detail |
| VAB027_RS03690 () | 784856..785188 | - | 333 | WP_000843587.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VAB027_RS03695 () | 785404..785769 | - | 366 | WP_046121679.1 | DUF3465 domain-containing protein | - |
| VAB027_RS03700 () | 785925..786929 | - | 1005 | WP_046126200.1 | LD-carboxypeptidase | - |
| VAB027_RS03705 () | 787233..788153 | + | 921 | WP_001896359.1 | IS5 family transposase ISVch8 | Transposase |
| VAB027_RS03710 () | 788131..788655 | - | 525 | WP_142741359.1 | hypothetical protein | - |
| VAB027_RS03715 () | 788803..789540 | - | 738 | WP_046126202.1 | hypothetical protein | - |
| VAB027_RS03720 () | 789683..790031 | - | 349 | Protein_717 | GrpB family protein | - |
| VAB027_RS03725 () | 790294..790749 | - | 456 | WP_000432865.1 | hypothetical protein | - |
| VAB027_RS03730 () | 790900..791421 | - | 522 | WP_000921691.1 | DUF2442 domain-containing protein | Antitoxin Detail |
| VAB027_RS03735 () | 791415..791684 | - | 270 | WP_001114075.1 | DUF4160 domain-containing protein | Toxin Detail |
| VAB027_RS20240 () | 791936..792031 | - | 96 | WP_001907607.1 | DUF645 family protein | - |
| VAB027_RS03740 () | 792442..792720 | + | 279 | WP_001258569.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| VAB027_RS03745 () | 792713..792982 | + | 270 | WP_000277238.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| VAB027_RS20150 () | 793578..794003 | - | 426 | WP_052724878.1 | hypothetical protein | - |
| VAB027_RS03755 () | 794150..794848 | - | 699 | WP_046126203.1 | HAD family phosphatase | - |
| VAB027_RS03760 () | 794939..795496 | - | 558 | WP_046126204.1 | GNAT family N-acetyltransferase | - |
| VAB027_RS03765 () | 795708..795956 | + | 249 | WP_000213183.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VAB027_RS03770 () | 795946..796236 | + | 291 | WP_000221352.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VAB027_RS20335 () | 796254..796364 | - | 111 | WP_082798255.1 | DUF3265 domain-containing protein | - |
| VAB027_RS03775 () | 796361..796678 | - | 318 | WP_001232701.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| VAB027_RS03780 () | 796689..796976 | - | 288 | WP_001162670.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VAB027_RS03785 () | 797328..797536 | - | 209 | Protein_732 | DUF3709 domain-containing protein | - |
| VAB027_RS20155 () | 797833..798465 | - | 633 | WP_046126205.1 | hypothetical protein | - |
| VAB027_RS19335 () | 798718..798999 | - | 282 | WP_080341684.1 | DUF1289 domain-containing protein | - |
| VAB027_RS20245 () | 798948..799061 | - | 114 | WP_080341690.1 | acetyltransferase | - |
| VAB027_RS03795 () | 799117..799497 | - | 381 | WP_046126206.1 | glyoxalase | - |
| VAB027_RS03800 () | 799640..799915 | - | 276 | WP_000436062.1 | hypothetical protein | - |
| VAB027_RS19350 () | 800197..800433 | - | 237 | WP_080341691.1 | DUF3709 domain-containing protein | - |
| VAB027_RS03805 () | 800715..801050 | - | 336 | WP_046126207.1 | hypothetical protein | - |
| VAB027_RS03815 () | 801510..801692 | - | 183 | WP_046126209.1 | DUF645 family protein | - |
| VAB027_RS20340 () | 802118..802192 | - | 75 | WP_108244119.1 | hypothetical protein | - |
| VAB027_RS20345 () | 802205..802357 | - | 153 | WP_142741475.1 | DUF3709 domain-containing protein | - |
| VAB027_RS19360 () | 802347..802514 | - | 168 | WP_080341693.1 | DUF3265 domain-containing protein | - |
| VAB027_RS20170 () | 802454..802756 | - | 303 | WP_046126210.1 | hypothetical protein | - |
| VAB027_RS03825 () | 802907..803242 | - | 336 | WP_039445746.1 | hypothetical protein | - |
| VAB027_RS19365 () | 803269..803385 | - | 117 | WP_079878422.1 | DUF3265 domain-containing protein | - |
| VAB027_RS19910 () | 803376..804053 | - | 678 | WP_046126211.1 | hypothetical protein | - |
| VAB027_RS03835 () | 804218..804757 | - | 540 | WP_046126212.1 | hydrolase | - |
| VAB027_RS03840 () | 804911..805198 | - | 288 | WP_000221354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VAB027_RS03845 () | 805188..805439 | - | 252 | WP_046126213.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VAB027_RS03850 () | 805703..805885 | - | 183 | WP_009355233.1 | DUF645 family protein | - |
| VAB027_RS03855 () | 806184..806429 | - | 246 | WP_000643598.1 | hypothetical protein | Antitoxin Detail |
| VAB027_RS03860 () | 806416..806682 | - | 267 | WP_000589156.1 | BrnT family toxin | Toxin Detail |
| VAB027_RS20350 () | 806703..806801 | - | 99 | WP_200894328.1 | acetyltransferase | Antitoxin Detail |
| VAB027_RS19380 () | 806990..807226 | - | 237 | WP_080341695.1 | DUF3709 domain-containing protein | - |
| VAB027_RS19385 () | 807386..807478 | - | 93 | Protein_756 | DUF3265 domain-containing protein | - |
| VAB027_RS03865 () | 807507..808241 | - | 735 | WP_046126214.1 | hypothetical protein | - |
| VAB027_RS03870 () | 808235..809557 | - | 1323 | WP_046126215.1 | AAA family ATPase | - |
| VAB027_RS03875 () | 809737..810273 | - | 537 | WP_042989109.1 | GNAT family N-acetyltransferase | - |
| VAB027_RS03880 () | 810431..810718 | - | 288 | WP_000221354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VAB027_RS03885 () | 810708..810959 | - | 252 | WP_001250177.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VAB027_RS03890 () | 811185..811784 | - | 600 | WP_046126216.1 | porin family protein | - |
| VAB027_RS03895 () | 811951..812364 | - | 414 | WP_046126217.1 | VOC family protein | - |
| VAB027_RS19400 () | 812396..812491 | - | 96 | WP_080341696.1 | acetyltransferase | Antitoxin Detail |
| VAB027_RS03900 () | 812548..813024 | - | 477 | WP_046126179.1 | GNAT family N-acetyltransferase | Toxin Detail |
| VAB027_RS03905 () | 813294..813572 | - | 279 | WP_032469024.1 | DUF3709 domain-containing protein | - |
| VAB027_RS03910 () | 813798..814550 | - | 753 | WP_046126218.1 | hypothetical protein | - |
| VAB027_RS03915 () | 814713..815246 | - | 534 | WP_032479087.1 | adenylate kinase | - |
| VAB027_RS03920 () | 815455..815636 | - | 182 | Protein_769 | DUF645 family protein | - |
| VAB027_RS03925 () | 815933..816433 | - | 501 | WP_046126219.1 | NAD(P)H-dependent oxidoreductase | - |
| VAB027_RS19405 () | 816631..816812 | - | 182 | Protein_771 | DUF645 family protein | - |
| VAB027_RS03940 () | 817107..817562 | - | 456 | WP_046126220.1 | hypothetical protein | - |
| VAB027_RS03945 () | 817731..818033 | - | 303 | WP_046126221.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VAB027_RS03950 () | 818021..818278 | - | 258 | WP_000861987.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VAB027_RS03955 () | 818478..818855 | - | 378 | WP_046126182.1 | hypothetical protein | - |
| VAB027_RS03960 () | 819119..820081 | + | 963 | WP_000841995.1 | integron integrase IntIA | - |
| VAB027_RS03965 () | 820163..820516 | - | 354 | WP_001138366.1 | 50S ribosomal protein L20 | - |
| VAB027_RS03970 () | 820558..820752 | - | 195 | WP_001885060.1 | 50S ribosomal protein L35 | - |
| VAB027_RS03975 () | 820856..821407 | - | 552 | WP_001894072.1 | translation initiation factor IF-3 | - |
| VAB027_RS03980 () | 821411..823339 | - | 1929 | WP_046126222.1 | threonine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|