Detailed information
Bioinformatically predicted
Overview
| Name | comR | Type | Regulator |
| Locus tag | ABC811_RS10360 | Genome accession | NZ_CP155535 |
| Coordinates | 1987670..1987861 (-) | Length | 63 a.a. |
| NCBI ID | WP_025169467.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain PJ755/1 | ||
| Function | activate transcription of comX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1982670..1992861
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABC811_RS10325 (ABC811_10325) | - | 1982728..1983603 (+) | 876 | WP_000669493.1 | substrate-binding domain-containing protein | - |
| ABC811_RS10330 (ABC811_10330) | pstC | 1983721..1984584 (+) | 864 | WP_000165893.1 | phosphate ABC transporter permease subunit PstC | - |
| ABC811_RS10335 (ABC811_10335) | pstA | 1984577..1985392 (+) | 816 | WP_000049768.1 | phosphate ABC transporter permease PstA | - |
| ABC811_RS10340 (ABC811_10340) | pstB | 1985394..1986146 (+) | 753 | WP_000536450.1 | phosphate ABC transporter ATP-binding protein PstB | - |
| ABC811_RS10345 (ABC811_10345) | phoU | 1986161..1986811 (+) | 651 | WP_001245781.1 | phosphate signaling complex protein PhoU | - |
| ABC811_RS10350 (ABC811_10350) | - | 1986873..1987304 (+) | 432 | Protein_1999 | transposase | - |
| ABC811_RS10355 (ABC811_10355) | - | 1987419..1987670 (-) | 252 | WP_001818970.1 | hypothetical protein | - |
| ABC811_RS10360 (ABC811_10360) | comR | 1987670..1987861 (-) | 192 | WP_025169467.1 | helix-turn-helix transcriptional regulator | Regulator |
| ABC811_RS10365 (ABC811_10365) | - | 1988073..1989089 (+) | 1017 | WP_000415116.1 | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | - |
| ABC811_RS10370 (ABC811_10370) | galU | 1989111..1990010 (+) | 900 | WP_000202235.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| ABC811_RS10375 (ABC811_10375) | - | 1990082..1990759 (-) | 678 | WP_000658498.1 | rhomboid family intramembrane serine protease | - |
| ABC811_RS10380 (ABC811_10380) | - | 1990743..1991282 (-) | 540 | WP_000834303.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| ABC811_RS10385 (ABC811_10385) | - | 1991294..1992424 (-) | 1131 | WP_000885071.1 | N-acetyldiaminopimelate deacetylase | - |
Sequence
Protein
Download Length: 63 a.a. Molecular weight: 7280.52 Da Isoelectric Point: 10.6965
>NTDB_id=997365 ABC811_RS10360 WP_025169467.1 1987670..1987861(-) (comR) [Streptococcus pneumoniae strain PJ755/1]
MREFGEKIKRLRLAKKISRSEFCGDESELSIRQLIRIENGESRPTLTKLKYIAERLGGVKITS
MREFGEKIKRLRLAKKISRSEFCGDESELSIRQLIRIENGESRPTLTKLKYIAERLGGVKITS
Nucleotide
Download Length: 192 bp
>NTDB_id=997365 ABC811_RS10360 WP_025169467.1 1987670..1987861(-) (comR) [Streptococcus pneumoniae strain PJ755/1]
TTGCGAGAGTTTGGCGAAAAAATTAAAAGATTACGTTTGGCTAAAAAAATCAGTCGTTCAGAATTTTGTGGTGATGAGTC
TGAATTAAGTATCCGTCAATTAATTAGAATTGAAAATGGAGAATCCAGACCAACACTAACAAAGTTAAAATATATCGCTG
AACGTTTGGGGGGGGTGAAGATTACAAGTTGA
TTGCGAGAGTTTGGCGAAAAAATTAAAAGATTACGTTTGGCTAAAAAAATCAGTCGTTCAGAATTTTGTGGTGATGAGTC
TGAATTAAGTATCCGTCAATTAATTAGAATTGAAAATGGAGAATCCAGACCAACACTAACAAAGTTAAAATATATCGCTG
AACGTTTGGGGGGGGTGAAGATTACAAGTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comR | Streptococcus pyogenes MGAS315 |
57.895 |
90.476 |
0.524 |
| comR | Streptococcus pyogenes MGAS8232 |
57.895 |
90.476 |
0.524 |
| comR | Streptococcus mutans UA159 |
57.895 |
90.476 |
0.524 |
| comR/comR1 | Streptococcus sobrinus strain NIDR 6715-7 |
60 |
87.302 |
0.524 |
| comR | Streptococcus salivarius strain HSISS4 |
56.604 |
84.127 |
0.476 |
| comR | Streptococcus salivarius SK126 |
56.604 |
84.127 |
0.476 |
| comR | Streptococcus suis D9 |
53.571 |
88.889 |
0.476 |
| comR | Streptococcus suis 05ZYH33 |
53.571 |
88.889 |
0.476 |
| comR | Streptococcus suis P1/7 |
53.571 |
88.889 |
0.476 |
| comR | Streptococcus thermophilus LMD-9 |
54.717 |
84.127 |
0.46 |
| comR | Streptococcus thermophilus LMG 18311 |
54.717 |
84.127 |
0.46 |
| comR/comR2 | Streptococcus sobrinus strain NIDR 6715-7 |
50 |
92.063 |
0.46 |
| comR | Streptococcus infantarius subsp. infantarius ATCC BAA-102 |
61.702 |
74.603 |
0.46 |