Detailed information NTG0972994

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACLKO2_RS21215
• Genome accession: NZ_CP178859
• Coordinates: 4354436..4355461 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli HB101
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4349436..4360461

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLKO2_RS21195 (ACLKO2_21195)	metJ	4350497..4350814 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACLKO2_RS21200 (ACLKO2_21200)	yiiX	4350998..4351606 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ACLKO2_RS21205 (ACLKO2_21205)	rpmE	4351667..4351879 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACLKO2_RS21210 (ACLKO2_21210)	priA	4352082..4354280 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
ACLKO2_RS21215 (ACLKO2_21215)	cytR	4354436..4355461 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACLKO2_RS21220 (ACLKO2_21220)	ftsN	4355553..4356512 (+)	960	WP_000068828.1	cell division protein FtsN	-
ACLKO2_RS21225 (ACLKO2_21225)	hslV	4356605..4357135 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACLKO2_RS21230 (ACLKO2_21230)	hslU	4357145..4358476 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACLKO2_RS21235 (ACLKO2_21235)	menA	4358543..4359469 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACLKO2_RS21240 (ACLKO2_21240)	rraA	4359562..4360047 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACLKO2_RS21245 (ACLKO2_21245)	zapB	4360132..4360377 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=972994 ACLKO2_RS21215 WP_000644904.1 4354436..4355461(+) (cytR) [Escherichia coli HB101]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=972994 ACLKO2_RS21215 WP_000644904.1 4354436..4355461(+) (cytR) [Escherichia coli HB101]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628