Detailed information NTG0966130

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: NSQ79_RS09555
• Genome accession: NZ_CP150200
• Coordinates: 2044415..2044729 (-)
• Length: 104 a.a.
• NCBI ID: WP_037611125.1
• Uniprot ID: -
• Organism: Streptococcus sp. FSL W7-1342
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2039415..2049729

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSQ79_RS09515 (NSQ79_09515)	-	2039679..2040335 (-)	657	WP_037601483.1	type II CAAX endopeptidase family protein	-
NSQ79_RS09520 (NSQ79_09520)	-	2040347..2040544 (-)	198	WP_002885716.1	helix-turn-helix transcriptional regulator	-
NSQ79_RS09525 (NSQ79_09525)	-	2040795..2041988 (-)	1194	WP_138261572.1	acetate kinase	-
NSQ79_RS09530 (NSQ79_09530)	comYH	2042045..2043001 (-)	957	WP_138261573.1	class I SAM-dependent methyltransferase	Machinery gene
NSQ79_RS09535 (NSQ79_09535)	comGG	2043046..2043363 (-)	318	WP_021144683.1	competence type IV pilus minor pilin ComGG	-
NSQ79_RS09540 (NSQ79_09540)	comYF	2043341..2043778 (-)	438	WP_045769383.1	competence type IV pilus minor pilin ComGF	Machinery gene
NSQ79_RS09545 (NSQ79_09545)	comGE	2043765..2043995 (-)	231	WP_002887015.1	competence type IV pilus minor pilin ComGE	-
NSQ79_RS09550 (NSQ79_09550)	comYD	2044027..2044455 (-)	429	WP_014632541.1	competence type IV pilus minor pilin ComGD	Machinery gene
NSQ79_RS09555 (NSQ79_09555)	comYC	2044415..2044729 (-)	315	WP_037611125.1	competence type IV pilus major pilin ComGC	Machinery gene
NSQ79_RS09560 (NSQ79_09560)	comYB	2044738..2045838 (-)	1101	WP_138261574.1	competence type IV pilus assembly protein ComGB	Machinery gene
NSQ79_RS09565 (NSQ79_09565)	comGA/cglA/cilD	2045720..2046661 (-)	942	WP_002887018.1	competence type IV pilus ATPase ComGA	Machinery gene
NSQ79_RS09570 (NSQ79_09570)	-	2046741..2047103 (-)	363	WP_049529260.1	DUF1033 family protein	-

Sequence

Protein

• Length: 104 a.a.
• Molecular weight: 11428.31 Da
• Isoelectric Point: 9.7150

>NTDB_id=966130 NSQ79_RS09555 WP_037611125.1 2044415..2044729(-) (comYC) [Streptococcus sp. FSL W7-1342]
MKKLNAVKLRAFTLIEMLVVLLIISILLLLFVPNLSKQKDSVKETGNAAVVKVVDSQAELYEMKNNKTASLAALVSEGQI
TQKQADSYNDYYAKHGGESRSVAN

Nucleotide

• Length: 315 bp

>NTDB_id=966130 NSQ79_RS09555 WP_037611125.1 2044415..2044729(-) (comYC) [Streptococcus sp. FSL W7-1342]
TTGAAAAAATTGAATGCCGTTAAACTACGAGCTTTTACACTGATTGAAATGCTGGTCGTGCTTCTCATTATCAGTATTCT
CCTTTTGCTCTTTGTACCTAACTTGAGCAAGCAGAAGGATTCTGTTAAAGAGACTGGAAATGCGGCTGTGGTCAAGGTCG
TGGATTCTCAAGCAGAACTTTATGAAATGAAGAATAATAAGACAGCTAGCTTAGCTGCTCTTGTTTCAGAAGGTCAAATC
ACGCAAAAACAGGCAGATTCATACAATGATTATTATGCGAAACATGGTGGCGAAAGCCGCTCAGTGGCCAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (10-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus mutans UA140	70.192	100	0.702
comYC	Streptococcus mutans UA159	70.192	100	0.702
comYC	Streptococcus gordonii str. Challis substr. CH1	64.762	100	0.654
comGC/cglC	Streptococcus mitis SK321	63.636	95.192	0.606
comGC/cglC	Streptococcus mitis NCTC 12261	59.406	97.115	0.577
comGC	Lactococcus lactis subsp. cremoris KW2	58.416	97.115	0.567
comGC/cglC	Streptococcus pneumoniae R6	59.596	95.192	0.567
comGC/cglC	Streptococcus pneumoniae Rx1	59.596	95.192	0.567
comGC/cglC	Streptococcus pneumoniae TIGR4	59.596	95.192	0.567
comGC/cglC	Streptococcus pneumoniae D39	59.596	95.192	0.567
comYC	Streptococcus suis isolate S10	61.364	84.615	0.519
comGC	Staphylococcus aureus MW2	50	75	0.375
comGC	Staphylococcus aureus N315	50	75	0.375