Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX   Type   Regulator
Locus tag   V6U68_RS00725 Genome accession   NZ_CP145866
Coordinates   123369..123866 (+) Length   165 a.a.
NCBI ID   WP_002885610.1    Uniprot ID   A0A2I1TJX9
Organism   Streptococcus salivarius strain KSS9     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 118369..128866
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U68_RS00720 (V6U68_00720) tnpA 122538..122816 (+) 279 Protein_100 IS200/IS605 family transposase -
  V6U68_RS00725 (V6U68_00725) comX 123369..123866 (+) 498 WP_002885610.1 sigma factor Regulator
  V6U68_RS00730 (V6U68_00730) - 123974..124816 (-) 843 WP_195413338.1 mechanosensitive ion channel family protein -
  V6U68_RS00735 (V6U68_00735) tig 124959..126242 (+) 1284 WP_410531723.1 trigger factor -
  V6U68_RS00740 (V6U68_00740) rpoE 126400..126975 (+) 576 WP_002885605.1 DNA-directed RNA polymerase subunit delta -
  V6U68_RS00745 (V6U68_00745) - 127228..128832 (+) 1605 WP_117647281.1 CTP synthase -

Sequence

Protein


Download         Length: 165 a.a.        Molecular weight: 20008.84 Da        Isoelectric Point: 4.9953

>NTDB_id=940688 V6U68_RS00725 WP_002885610.1 123369..123866(+) (comX) [Streptococcus salivarius strain KSS9]
MEQEVFVHAYEVVRPIVLKASRQYFIQLWDLADMEQEAMMTLYQLLEKFPELKSDDDKLRRYFKTKFRNRLNDEVRRQES
VKRQANRQCYIEISDIAFCLPNKELDAVDRLVYDEQLNAFRNQLSSEDATKLDRLLAGECFRGRKKMIRELKFWMVDFDP
YNEDD

Nucleotide


Download         Length: 498 bp        

>NTDB_id=940688 V6U68_RS00725 WP_002885610.1 123369..123866(+) (comX) [Streptococcus salivarius strain KSS9]
ATGGAACAAGAAGTTTTTGTTCACGCATATGAAGTTGTAAGGCCGATTGTACTTAAGGCTAGTAGACAATATTTCATCCA
ACTTTGGGACCTTGCTGATATGGAGCAAGAGGCTATGATGACGCTTTATCAGCTTTTAGAAAAGTTTCCTGAATTAAAGT
CTGATGATGATAAGTTACGGCGTTATTTTAAAACTAAATTTAGGAATAGACTTAATGATGAGGTTAGAAGGCAGGAGTCT
GTAAAACGTCAAGCTAATCGACAATGTTATATTGAAATTTCAGATATTGCTTTTTGTCTTCCAAATAAAGAGTTAGATGC
TGTTGATAGGCTTGTTTATGATGAGCAGCTTAATGCTTTCCGTAATCAGTTGTCTTCGGAAGATGCTACTAAGTTAGACC
GTTTGCTAGCTGGGGAGTGTTTTAGAGGTCGAAAAAAGATGATTCGAGAGTTAAAATTTTGGATGGTTGATTTTGATCCT
TACAATGAAGATGATTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2I1TJX9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.