Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX   Type   Regulator
Locus tag   V6U67_RS00840 Genome accession   NZ_CP145865
Coordinates   142070..142567 (+) Length   165 a.a.
NCBI ID   WP_002885610.1    Uniprot ID   A0A2I1TJX9
Organism   Streptococcus salivarius strain KSS8     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 137070..147567
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U67_RS00840 (V6U67_00840) comX 142070..142567 (+) 498 WP_002885610.1 sigma factor Regulator
  V6U67_RS00845 (V6U67_00845) - 142675..143517 (-) 843 WP_041826643.1 mechanosensitive ion channel family protein -
  V6U67_RS00850 (V6U67_00850) tig 143660..144943 (+) 1284 WP_002885606.1 trigger factor -
  V6U67_RS00855 (V6U67_00855) rpoE 145101..145676 (+) 576 WP_002885605.1 DNA-directed RNA polymerase subunit delta -
  V6U67_RS00860 (V6U67_00860) - 145929..147533 (+) 1605 WP_022496517.1 CTP synthase -

Sequence

Protein


Download         Length: 165 a.a.        Molecular weight: 20008.84 Da        Isoelectric Point: 4.9953

>NTDB_id=940621 V6U67_RS00840 WP_002885610.1 142070..142567(+) (comX) [Streptococcus salivarius strain KSS8]
MEQEVFVHAYEVVRPIVLKASRQYFIQLWDLADMEQEAMMTLYQLLEKFPELKSDDDKLRRYFKTKFRNRLNDEVRRQES
VKRQANRQCYIEISDIAFCLPNKELDAVDRLVYDEQLNAFRNQLSSEDATKLDRLLAGECFRGRKKMIRELKFWMVDFDP
YNEDD

Nucleotide


Download         Length: 498 bp        

>NTDB_id=940621 V6U67_RS00840 WP_002885610.1 142070..142567(+) (comX) [Streptococcus salivarius strain KSS8]
ATGGAACAAGAAGTTTTTGTTCATGCATATGAAGTTGTAAGGCCGATTGTACTTAAGGCTAGTAGACAATATTTCATCCA
ACTTTGGGACCTTGCTGATATGGAGCAAGAGGCTATGATGACGCTTTATCAGCTTTTAGAAAAGTTTCCTGAATTAAAGT
CTGATGATGATAAGTTACGGCGTTATTTTAAAACTAAATTTAGGAATAGACTTAATGATGAGGTTAGAAGGCAGGAGTCT
GTAAAACGTCAAGCTAATCGACAATGTTATATTGAAATTTCAGATATTGCTTTTTGTCTTCCAAATAAAGAGTTAGATGC
TGTTGATAGGCTTGTTTATGATGAGCAGCTTAATGCTTTCCGTAATCAGTTGTCTTCGGAAGATGCTACTAAGTTAGACC
GTTTGCTAGCTGGGGAGTGTTTTAGAGGTCGAAAAAAGATGATCAGAGAGTTAAAATTTTGGATGGTTGATTTTGATCCT
TACAATGAAGATGATTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2I1TJX9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.