Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX   Type   Regulator
Locus tag   V6U66_RS00765 Genome accession   NZ_CP145864
Coordinates   125848..126345 (+) Length   165 a.a.
NCBI ID   WP_049529225.1    Uniprot ID   A0AAW7PLK9
Organism   Streptococcus salivarius strain KSS7     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 120848..131345
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U66_RS00765 (V6U66_00765) comX/sigX 125848..126345 (+) 498 WP_049529225.1 sigma factor Regulator
  V6U66_RS00770 (V6U66_00770) - 126453..127295 (-) 843 WP_049529224.1 mechanosensitive ion channel family protein -
  V6U66_RS00775 (V6U66_00775) tig 127438..128721 (+) 1284 WP_155214103.1 trigger factor -
  V6U66_RS00780 (V6U66_00780) rpoE 128879..129454 (+) 576 WP_002885605.1 DNA-directed RNA polymerase subunit delta -
  V6U66_RS00785 (V6U66_00785) - 129707..131311 (+) 1605 WP_049529222.1 CTP synthase -

Sequence

Protein


Download         Length: 165 a.a.        Molecular weight: 20037.83 Da        Isoelectric Point: 4.9953

>NTDB_id=940549 V6U66_RS00765 WP_049529225.1 125848..126345(+) (comX/sigX) [Streptococcus salivarius strain KSS7]
MEQEIFVHAYEVVRPIVLKASRQYFIQLWDQADMEQEAMMTLYQLLEKFPELKSDDDKLRRYFKTKFRNRLNDEVRRQES
VKRQANRQCYIEISDIAFCLPNKELDAVDRLVYDEQLNAFRNQLSSEDATKLDRLLAGECFRGRKKMIRELKFWMVDFDP
YNEDD

Nucleotide


Download         Length: 498 bp        

>NTDB_id=940549 V6U66_RS00765 WP_049529225.1 125848..126345(+) (comX/sigX) [Streptococcus salivarius strain KSS7]
ATGGAACAAGAAATTTTTGTTCACGCATATGAAGTTGTAAGGCCGATTGTACTTAAGGCTAGTAGACAATATTTCATCCA
ACTTTGGGACCAAGCTGATATGGAGCAAGAGGCTATGATGACGCTTTATCAGCTTTTAGAAAAGTTTCCTGAATTAAAGT
CTGATGATGATAAGCTACGGCGTTATTTTAAAACGAAATTTAGGAATAGACTTAATGATGAGGTTAGAAGGCAGGAGTCT
GTAAAACGACAAGCTAATCGACAATGTTATATCGAAATTTCAGATATTGCTTTTTGTCTTCCAAATAAAGAGTTAGATGC
TGTTGATAGGCTTGTTTATGATGAGCAGCTTAATGCTTTCCGTAATCAGTTGTCTTCGGAAGATGCTACTAAGTTAGACC
GTTTGCTAGCTGGGGAGTGTTTTAGAGGTCGAAAAAAGATGATCAGAGAGTTAAAATTTTGGATGGTTGATTTTGATCCT
TACAATGAAGATGATTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.