Detailed information    

insolico Bioinformatically predicted

Overview

Name   uvrA   Type   Machinery gene
Locus tag   AB5J55_RS37975 Genome accession   NZ_CP163432
Coordinates   8197635..8199968 (-) Length   777 a.a.
NCBI ID   WP_369274972.1    Uniprot ID   -
Organism   Streptomyces sp. R11     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 8192635..8204968
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB5J55_RS37955 (AB5J55_37955) - 8194020..8194766 (+) 747 WP_369274969.1 succinate dehydrogenase/fumarate reductase iron-sulfur subunit -
  AB5J55_RS37960 (AB5J55_37960) - 8195069..8195839 (+) 771 WP_369274970.1 GNAT family N-acetyltransferase -
  AB5J55_RS37965 (AB5J55_37965) - 8195854..8196522 (+) 669 Protein_7494 lysophospholipid acyltransferase family protein -
  AB5J55_RS37970 (AB5J55_37970) - 8196724..8197479 (-) 756 WP_369274971.1 hypothetical protein -
  AB5J55_RS37975 (AB5J55_37975) uvrA 8197635..8199968 (-) 2334 WP_369274972.1 ABC transporter Machinery gene
  AB5J55_RS37980 (AB5J55_37980) - 8200154..8201470 (+) 1317 WP_369274973.1 phytase -
  AB5J55_RS37985 (AB5J55_37985) - 8201496..8202494 (-) 999 WP_369274974.1 LLM class flavin-dependent oxidoreductase -
  AB5J55_RS37990 (AB5J55_37990) - 8202529..8203902 (-) 1374 WP_369274975.1 FAD-binding oxidoreductase -

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 82548.59 Da        Isoelectric Point: 6.8437

>NTDB_id=925060 AB5J55_RS37975 WP_369274972.1 8197635..8199968(-) (uvrA) [Streptomyces sp. R11]
MHSPHDPYVRVRGAREHNLRGVDVDIPRDVLAVFTGVSGSGKSSLAFGTIYAEAQRRYFESVAPYARRLIHQVGAPKVGE
ITGLPPAVSLQQRRSAPTSRSSVGTVTNLSNSLRMLYSRAGDYPPGAERLDSDSFSPNTAAGACPECHGLGQVHRTTEEL
LVPDPGLSIREGAITAWPGAWQGKNLRDILDALGHDVDRPWHELPAEEREWILFTDEQPVVTVHPVRDADRIQRPYQGTY
MSARRYVMKTFADSKSPTLRAKAERFLAAAPCPACGGSRLRPEALAVTFGGRTIADVAALPLTELAGLLEGGSSEAARVL
SEDLKSRIGPVVELGLGYLSLDRATPTLSAGELQRLRLATQLRSGLFGVVYVLDEPSAGLHPADTEALLTVLARLKAGGN
TVFVVEHHLDVMRGADWLVDVGPQAGEHGGQVLHSGPVAELAGVKESATARFLFDGSPAAARQVRAPRGQLKVGPVTRHN
LRGVTAEFPLGVFTAVTGVSGSGKSTLIGEITEEQAAVGRLVSVDQKPIGRTPRSNLATYTGLFDVVRKVFAATDEARAR
GYGVGRFSFNVAGGRCETCQGEGFVSVELLFLPSTYAPCPDCGGARYNPETLEVAYRGRNIAQVLDLTVEAAAEFFADTP
AVARSLGALLDVGLGYLRLGQPATELSGGEAQRIKLASELQRGRRGHTLYLLDEPTTGLHPADVEVLMRQLHGLVDAGHT
VVVVEHDMSVVAGADWVIDLGPGGGDAGGRIVAAGPPVDVARAKGSATAPYLARVMP

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=925060 AB5J55_RS37975 WP_369274972.1 8197635..8199968(-) (uvrA) [Streptomyces sp. R11]
ATGCACTCCCCGCACGACCCCTACGTCCGCGTCCGCGGCGCCCGTGAGCACAACCTCAGGGGCGTGGACGTCGACATCCC
ACGGGACGTGCTGGCCGTGTTCACCGGTGTGTCCGGGTCCGGGAAGTCGTCGCTCGCCTTCGGCACGATCTACGCGGAGG
CCCAGCGGCGCTACTTCGAGTCGGTCGCGCCGTACGCACGCAGGCTGATCCACCAGGTCGGTGCACCGAAGGTCGGTGAG
ATCACCGGGCTGCCGCCCGCCGTGTCCCTCCAGCAGCGCCGCTCGGCGCCGACGTCCCGCTCCTCCGTCGGCACGGTCAC
CAACCTCTCCAACTCCCTGCGGATGCTGTACTCCCGGGCCGGCGACTACCCGCCGGGCGCCGAGCGGCTCGACTCGGACT
CCTTCTCACCGAATACGGCGGCCGGGGCGTGCCCGGAGTGCCACGGGCTCGGGCAGGTGCACCGTACGACCGAGGAGTTG
CTGGTTCCCGATCCGGGGCTGTCGATCCGGGAGGGCGCGATCACCGCGTGGCCGGGTGCCTGGCAGGGCAAGAACCTGCG
CGACATCCTCGACGCGCTCGGTCACGACGTCGACCGGCCCTGGCACGAGCTGCCCGCCGAGGAGCGGGAGTGGATCCTGT
TCACCGACGAGCAGCCGGTCGTCACCGTGCACCCGGTGCGCGACGCCGACCGCATCCAACGGCCGTACCAGGGCACGTAC
ATGAGCGCCCGCCGGTACGTCATGAAGACTTTCGCCGACTCCAAGAGCCCGACCCTCAGGGCGAAGGCGGAGCGGTTCCT
CGCCGCAGCGCCCTGCCCGGCGTGCGGCGGCAGCAGGCTGCGGCCCGAGGCGCTGGCGGTGACCTTCGGCGGCCGGACGA
TCGCCGATGTGGCCGCGCTGCCGCTCACGGAGCTGGCGGGGTTGCTGGAGGGCGGCTCCTCGGAGGCGGCCCGTGTCCTC
AGCGAGGACCTCAAGTCCCGTATCGGGCCCGTCGTCGAGCTCGGCCTCGGCTATCTGAGCCTCGACCGCGCCACGCCCAC
GCTCTCGGCGGGCGAACTGCAGCGCCTGCGGCTCGCGACGCAGCTGCGGTCCGGGCTGTTCGGTGTCGTGTACGTCCTCG
ACGAGCCGTCCGCGGGACTGCACCCGGCGGACACCGAGGCGCTGCTGACGGTGCTGGCGCGACTGAAGGCGGGCGGGAAC
ACGGTGTTCGTGGTCGAGCATCATCTCGACGTCATGCGCGGCGCCGACTGGCTGGTGGACGTGGGACCGCAGGCGGGTGA
GCACGGCGGGCAGGTGCTGCACAGCGGGCCGGTGGCGGAGCTGGCGGGGGTCAAGGAGTCGGCGACCGCGCGCTTCCTCT
TCGACGGCTCGCCCGCTGCCGCACGCCAAGTGCGTGCCCCGCGCGGCCAGTTGAAGGTCGGCCCGGTCACCCGGCACAAC
CTGCGCGGGGTGACCGCCGAGTTCCCGCTCGGTGTGTTCACGGCCGTCACCGGCGTCTCGGGTTCGGGCAAGTCCACGCT
CATCGGCGAGATCACCGAGGAGCAGGCGGCTGTCGGGCGGCTGGTCTCGGTCGACCAGAAGCCGATCGGCCGCACCCCGC
GTTCCAACCTCGCCACCTACACCGGGCTCTTCGACGTCGTACGCAAGGTGTTCGCGGCCACGGACGAGGCGCGGGCGCGC
GGTTACGGCGTCGGCCGCTTCTCGTTCAACGTCGCGGGCGGACGGTGCGAGACCTGTCAGGGCGAGGGCTTCGTCAGCGT
GGAGCTGCTGTTCCTGCCGAGCACGTACGCGCCGTGCCCGGACTGCGGCGGGGCCCGCTACAACCCCGAGACGCTGGAAG
TGGCGTACCGGGGACGGAACATCGCACAGGTGCTGGACCTCACGGTCGAGGCGGCGGCGGAGTTCTTCGCGGACACCCCG
GCCGTGGCCCGCAGCCTCGGCGCCCTGCTCGACGTGGGCCTCGGCTATCTGCGTCTCGGGCAGCCCGCCACCGAGCTGTC
CGGCGGTGAGGCCCAGCGCATCAAGCTGGCGAGCGAGTTGCAGCGCGGCCGGCGCGGCCACACCCTCTACCTCCTCGACG
AGCCGACGACCGGACTCCACCCGGCCGACGTCGAGGTGCTGATGCGCCAGCTGCACGGGCTCGTCGACGCCGGACACACC
GTCGTCGTGGTCGAGCACGACATGTCCGTCGTCGCGGGCGCGGACTGGGTGATCGACCTGGGGCCGGGCGGTGGTGACGC
GGGCGGACGGATCGTGGCGGCGGGCCCGCCGGTGGACGTGGCTCGGGCGAAGGGGAGCGCCACGGCGCCGTATCTGGCCC
GTGTCATGCCGTAA

Domains

Predicted by InterProScan.

UvrA DNA-binding domain (UvrA_DNA-bind)

(159-265)

ABC transporter (ABC_tran)

(481-696)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  uvrA Streptococcus pneumoniae R6

42.899

87.902

0.377
  uvrA Streptococcus pneumoniae TIGR4

42.899

87.902

0.377
  uvrA Streptococcus pneumoniae D39

42.899

87.902

0.377