Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   VKP55_RS06165 Genome accession   NZ_CP142351
Coordinates   1232079..1232261 (-) Length   60 a.a.
NCBI ID   WP_011184907.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain SS1366     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1227079..1237261
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VKP55_RS06155 (VKP55_06155) rocA 1228513..1229868 (-) 1356 WP_011528847.1 transcriptional regulator RocA -
  VKP55_RS06160 (VKP55_06160) rlmD 1230533..1231888 (-) 1356 WP_002991789.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  VKP55_RS06165 (VKP55_06165) prx 1232079..1232261 (-) 183 WP_011184907.1 hypothetical protein Regulator
  VKP55_RS06170 (VKP55_06170) sda3 1232499..1233299 (+) 801 WP_326673958.1 streptodornase Sda3 -
  VKP55_RS06175 (VKP55_06175) - 1233571..1234005 (+) 435 WP_011017966.1 hypothetical protein -
  VKP55_RS06180 (VKP55_06180) - 1234055..1234921 (-) 867 WP_011888701.1 DUF334 domain-containing protein -
  VKP55_RS06185 (VKP55_06185) - 1234909..1235433 (-) 525 WP_011017840.1 Panacea domain-containing protein -
  VKP55_RS06190 (VKP55_06190) - 1235573..1236778 (-) 1206 WP_011888700.1 glucosaminidase domain-containing protein -
  VKP55_RS06195 (VKP55_06195) - 1236766..1236888 (-) 123 WP_029713948.1 hypothetical protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6976.99 Da        Isoelectric Point: 4.2550

>NTDB_id=925059 VKP55_RS06165 WP_011184907.1 1232079..1232261(-) (prx) [Streptococcus pyogenes strain SS1366]
MLTYDEFKQAIDRGYITGDTVMIVRKNGQIFDYVLPHEKVKNGEVVTEEIVEEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=925059 VKP55_RS06165 WP_011184907.1 1232079..1232261(-) (prx) [Streptococcus pyogenes strain SS1366]
ATGCTAACATACGACGAGTTTAAACAAGCGATTGACCGTGGATATATCACAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTTTTGCCACATGAGAAAGTAAAAAATGGAGAAGTTGTGACCGAGGAGATAGTGGAAGAAG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS8232

85

100

0.85
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS315

83.333

100

0.833
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

88.372

71.667

0.633
  prx Streptococcus pyogenes MGAS315

78.571

70

0.55