Detailed information NTG0896105

Bioinformatically predicted

Overview

• Name: comGC/cglC
• Type: Machinery gene
• Locus tag: R4707_RS04710
• Genome accession: NZ_CP137113
• Coordinates: 868988..869314 (-)
• Length: 108 a.a.
• NCBI ID: WP_000738632.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain ZGX
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 863988..874314

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4707_RS04665	rnpA	864005..864376 (-)	372	WP_000739246.1	ribonuclease P protein component	-
R4707_RS04670	-	864393..864524 (-)	132	WP_000768904.1	hypothetical protein	-
R4707_RS04675	-	864525..865715 (-)	1191	WP_000167766.1	acetate kinase	-
R4707_RS04680	comYH	865766..866719 (-)	954	WP_000345100.1	class I SAM-dependent methyltransferase	Machinery gene
R4707_RS04685	-	866780..867374 (-)	595	Protein_892	class I SAM-dependent methyltransferase	-
R4707_RS04690	comGG/cglG	867511..867924 (-)	414	WP_000265631.1	competence type IV pilus minor pilin ComGG	Machinery gene
R4707_RS04695	comGF/cglF	867902..868363 (-)	462	WP_050104011.1	competence type IV pilus minor pilin ComGF	Machinery gene
R4707_RS04700	comGE/cglE	868326..868628 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
R4707_RS04705	comGD/cglD	868591..868995 (-)	405	WP_000588020.1	competence type IV pilus minor pilin ComGD	Machinery gene
R4707_RS04710	comGC/cglC	868988..869314 (-)	327	WP_000738632.1	comG operon protein ComGC	Machinery gene
R4707_RS04715	comGB/cglB	869316..870332 (-)	1017	WP_075218762.1	competence type IV pilus assembly protein ComGB	Machinery gene
R4707_RS04720	comGA/cglA/cilD	870280..871221 (-)	942	WP_000249571.1	competence type IV pilus ATPase ComGA	Machinery gene
R4707_RS04725	-	871297..871662 (-)	366	WP_000286415.1	DUF1033 family protein	-
R4707_RS04730	-	871813..872871 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-
R4707_RS04735	nagA	873034..874185 (-)	1152	WP_001134457.1	N-acetylglucosamine-6-phosphate deacetylase	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 12180.34 Da
• Isoelectric Point: 10.0305

>NTDB_id=896105 R4707_RS04710 WP_000738632.1 868988..869314(-) (comGC/cglC) [Streptococcus pneumoniae strain ZGX]
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLEKNEDASLSKLKD
DGRITEEQVKAYKEYNDKNGGANRKVND

Nucleotide

• Length: 327 bp

>NTDB_id=896105 R4707_RS04710 WP_000738632.1 868988..869314(-) (comGC/cglC) [Streptococcus pneumoniae strain ZGX]
ATGAAAAAAATGATGACATTCTTGAAAAAAGCTAAGGTTAAAGCTTTTACATTGGTGGAGATGTTGGTGGTCTTGCTGAT
TATCAGCGTGCTTTTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAAGCAGTCAATGACAAAGGAAAAGCAGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAACTTTATAGCTTGGAAAAGAATGAAGATGCTAGCCTAAGCAAGTTAAAAGAC
GATGGGCGAATCACGGAAGAACAGGTTAAAGCTTATAAAGAATACAATGATAAAAATGGAGGAGCAAATCGTAAAGTCAA
TGATTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (11-34)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC/cglC	Streptococcus pneumoniae TIGR4	96.296	100	0.963
comGC/cglC	Streptococcus pneumoniae Rx1	95.37	100	0.954
comGC/cglC	Streptococcus pneumoniae D39	95.37	100	0.954
comGC/cglC	Streptococcus pneumoniae R6	95.37	100	0.954
comGC/cglC	Streptococcus mitis SK321	92.593	100	0.926
comGC/cglC	Streptococcus mitis NCTC 12261	91.919	91.667	0.843
comYC	Streptococcus gordonii str. Challis substr. CH1	66.99	95.37	0.639
comYC	Streptococcus mutans UA159	61.765	94.444	0.583
comYC	Streptococcus mutans UA140	61.765	94.444	0.583
comGC	Lactococcus lactis subsp. cremoris KW2	55.882	94.444	0.528
comYC	Streptococcus suis isolate S10	66.667	75	0.5
comGC	Staphylococcus aureus MW2	48.837	79.63	0.389
comGC	Staphylococcus aureus N315	48.837	79.63	0.389
comGC	Latilactobacillus sakei subsp. sakei 23K	45.349	79.63	0.361