Detailed information NTG0877680

Bioinformatically predicted

Overview

• Name: comGC/cglC
• Type: Machinery gene
• Locus tag: RIM64_RS00700
• Genome accession: NZ_CP133951
• Coordinates: 119989..120312 (+)
• Length: 107 a.a.
• NCBI ID: WP_012677235.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain JMC111
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 114989..125312

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RIM64_RS00680 (RIM64_00680)	-	115251..117254 (+)	2004	WP_012677231.1	DUF1430 domain-containing protein	-
RIM64_RS00685 (RIM64_00685)	-	117256..117903 (+)	648	WP_012677232.1	ATP-binding cassette domain-containing protein	-
RIM64_RS00690 (RIM64_00690)	comGA/cglA	118083..119021 (+)	939	WP_012677233.1	competence type IV pilus ATPase ComGA	Machinery gene
RIM64_RS00695 (RIM64_00695)	comYB	118954..119988 (+)	1035	WP_228273970.1	competence type IV pilus assembly protein ComGB	Machinery gene
RIM64_RS00700 (RIM64_00700)	comGC/cglC	119989..120312 (+)	324	WP_012677235.1	competence type IV pilus major pilin ComGC	Machinery gene
RIM64_RS00705 (RIM64_00705)	comGD	120290..120715 (+)	426	WP_012514783.1	competence type IV pilus minor pilin ComGD	-
RIM64_RS00710 (RIM64_00710)	comGE	120720..120962 (+)	243	WP_012677236.1	competence type IV pilus minor pilin ComGE	-
RIM64_RS00715 (RIM64_00715)	comYF	120949..121383 (+)	435	WP_115266549.1	competence type IV pilus minor pilin ComGF	Machinery gene
RIM64_RS00720 (RIM64_00720)	comGG	121361..121723 (+)	363	WP_115266550.1	competence type IV pilus minor pilin ComGG	-
RIM64_RS00725 (RIM64_00725)	comYH	121785..122738 (+)	954	WP_165619320.1	class I SAM-dependent methyltransferase	Machinery gene
RIM64_RS00730 (RIM64_00730)	-	122798..124000 (+)	1203	WP_115266552.1	acetate kinase	-
RIM64_RS00735 (RIM64_00735)	-	124370..124984 (-)	615	WP_042669829.1	hypothetical protein	-

Sequence

Protein

• Length: 107 a.a.
• Molecular weight: 12107.16 Da
• Isoelectric Point: 9.3196

>NTDB_id=877680 RIM64_RS00700 WP_012677235.1 119989..120312(+) (comGC/cglC) [Streptococcus equi subsp. zooepidemicus strain JMC111]
MKMRLSTLKGQAIQAFTLLEMLLVLLIISVLMLLFVPNLSKQKDKVTDTGNAAVVKLVENQAELYELSHGEKPSLKQLQE
DGSISDKQQKAYQDYYAKHKDEAKKLN

Nucleotide

• Length: 324 bp

>NTDB_id=877680 RIM64_RS00700 WP_012677235.1 119989..120312(+) (comGC/cglC) [Streptococcus equi subsp. zooepidemicus strain JMC111]
ATGAAAATGAGATTATCAACCTTAAAAGGTCAAGCTATTCAGGCCTTCACTTTGCTGGAAATGCTTCTGGTTTTGTTAAT
CATTAGTGTTTTGATGCTGTTATTTGTTCCAAATTTAAGTAAGCAAAAGGATAAGGTGACAGATACAGGCAACGCTGCAG
TGGTAAAGCTAGTTGAAAATCAGGCAGAGCTTTATGAATTATCACATGGGGAAAAGCCAAGCCTGAAGCAGCTGCAAGAG
GATGGAAGCATCAGTGACAAGCAACAAAAGGCTTATCAGGATTATTATGCAAAGCATAAAGATGAAGCTAAGAAGCTCAA
TTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC/cglC	Streptococcus mitis SK321	58.879	100	0.589
comGC/cglC	Streptococcus pneumoniae Rx1	57.009	100	0.57
comGC/cglC	Streptococcus pneumoniae D39	57.009	100	0.57
comGC/cglC	Streptococcus pneumoniae R6	57.009	100	0.57
comGC/cglC	Streptococcus pneumoniae TIGR4	57.009	100	0.57
comYC	Streptococcus gordonii str. Challis substr. CH1	59.406	94.393	0.561
comGC/cglC	Streptococcus mitis NCTC 12261	60.606	92.523	0.561
comYC	Streptococcus mutans UA140	57.732	90.654	0.523
comYC	Streptococcus mutans UA159	57.732	90.654	0.523
comGC	Lactococcus lactis subsp. cremoris KW2	56.842	88.785	0.505
comYC	Streptococcus suis isolate S10	58.75	74.766	0.439
comGC	Staphylococcus aureus MW2	50.649	71.963	0.364
comGC	Staphylococcus aureus N315	50.649	71.963	0.364