Detailed information NTG0861074

Bioinformatically predicted

Overview

• Name: pilT
• Type: Machinery gene
• Locus tag: Q3H53_RS14585
• Genome accession: NZ_CP130696
• Coordinates: 3049940..3051046 (-)
• Length: 368 a.a.
• NCBI ID: WP_002742598.1
• Uniprot ID: A0AB33BRR3
• Organism: Microcystis aeruginosa PCC 7806
• Function: type IV pilus retraction (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3044940..3056046

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q3H53_RS14575 (Q3H53_002913)	-	3045794..3048364 (+)	2571	WP_004156918.1	TIGR03960 family B12-binding radical SAM protein	-
Q3H53_RS14580 (Q3H53_002914)	-	3048585..3049799 (-)	1215	WP_036400185.1	type II secretion system F family protein	-
Q3H53_RS14585 (Q3H53_002915)	pilT	3049940..3051046 (-)	1107	WP_002742598.1	type IV pilus twitching motility protein PilT	Machinery gene
Q3H53_RS14590 (Q3H53_002916)	pilB/pilB1	3051199..3053214 (-)	2016	WP_002742599.1	GspE/PulE family protein	Machinery gene
Q3H53_RS14595 (Q3H53_002917)	grpE	3053455..3054177 (+)	723	WP_002742600.1	nucleotide exchange factor GrpE	-
Q3H53_RS14600 (Q3H53_002918)	-	3054272..3054913 (-)	642	WP_002742601.1	HAD-IA family hydrolase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 40593.94 Da
• Isoelectric Point: 7.8137

>NTDB_id=861074 Q3H53_RS14585 WP_002742598.1 3049940..3051046(-) (pilT) [Microcystis aeruginosa PCC 7806]
MELMIEDLMEQLVEMGGSDMHIQSRAPVYFRISGKLIPINEKSLTPQDCQKLIFSMLNNTQIKELEQNWELDCSYGVKGL
ARFRINVYKERGAYAACLRALSSKMPNFEQLNLPAVIRELSERPRGLILVTGQTGSGKTTTLAAILDLINRTSSEHILTV
EDPIEYVFPNIKSLFHQRQKGEDTKSFANALRSALREDPDIILVGEMRDLETISLAITAAETGHLVFGTLHTSSAAGTVD
RIIDVFPANQQAQIRAMLSNSLLAVFSQNLVKKKNPKPGEFGRAMVQEIMVVTPAIANLIREGKAPQVYSAIQTGMKLGM
QTMEQGLANLVVSGVISFEEAISKSSKPDELQRLVAGSVANAKTKARF

Nucleotide

• Length: 1107 bp

>NTDB_id=861074 Q3H53_RS14585 WP_002742598.1 3049940..3051046(-) (pilT) [Microcystis aeruginosa PCC 7806]
ATGGAATTAATGATCGAAGATTTAATGGAACAATTGGTCGAGATGGGCGGTTCCGATATGCACATTCAGTCCCGTGCGCC
GGTCTATTTTCGCATTAGTGGCAAACTCATCCCGATTAATGAAAAATCTTTAACCCCGCAAGATTGTCAGAAATTGATTT
TTAGTATGCTCAATAATACTCAAATAAAAGAGTTAGAGCAGAATTGGGAATTAGACTGTTCATACGGGGTGAAAGGATTA
GCAAGATTTAGGATCAATGTTTATAAAGAAAGGGGAGCCTATGCAGCTTGTTTACGCGCTTTGTCCTCTAAAATGCCTAA
CTTTGAACAATTAAATTTACCAGCAGTGATCCGAGAATTATCGGAAAGACCGAGGGGATTAATTCTCGTAACTGGCCAAA
CAGGTTCAGGTAAAACTACCACTTTAGCGGCAATTTTAGACTTAATTAATCGGACTAGTTCTGAACATATTTTGACTGTA
GAAGACCCAATTGAATACGTTTTTCCTAATATAAAAAGCCTGTTTCACCAACGACAAAAAGGAGAAGATACCAAGAGTTT
TGCTAACGCATTAAGATCAGCGTTACGAGAAGACCCTGATATTATCCTTGTGGGAGAAATGCGGGATTTAGAAACAATTA
GTTTGGCAATTACGGCGGCGGAAACCGGTCACTTAGTCTTCGGAACCCTACACACTAGCTCGGCAGCGGGAACAGTGGAT
CGGATTATTGACGTTTTCCCCGCTAACCAACAGGCACAAATTCGCGCCATGTTATCCAATTCTTTACTAGCAGTTTTTAG
TCAAAACCTAGTCAAGAAAAAAAATCCCAAACCGGGGGAATTTGGCCGGGCAATGGTACAGGAAATCATGGTGGTAACTC
CAGCGATCGCCAACCTAATTCGCGAAGGAAAAGCCCCCCAAGTTTACTCGGCAATTCAAACGGGAATGAAGCTAGGAATG
CAAACTATGGAACAGGGATTAGCTAATTTAGTTGTTAGCGGTGTTATATCCTTTGAAGAGGCAATTTCTAAAAGTAGTAA
ACCCGATGAATTACAACGTCTGGTCGCTGGGTCCGTTGCTAACGCCAAAACTAAAGCCCGTTTCTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (14-273)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilT	Pseudomonas aeruginosa PAK	51.297	94.293	0.484
pilT	Legionella pneumophila strain Lp02	51.594	93.75	0.484
pilT	Legionella pneumophila strain ERS1305867	51.594	93.75	0.484
pilT	Pseudomonas stutzeri DSM 10701	50.432	94.293	0.476
pilT	Acinetobacter nosocomialis M2	50.432	94.293	0.476
pilT	Acinetobacter baumannii D1279779	50.432	94.293	0.476
pilT	Acinetobacter baumannii strain A118	50.432	94.293	0.476
pilT	Acinetobacter baylyi ADP1	49.856	94.293	0.47
pilT	Vibrio cholerae strain A1552	49.706	92.391	0.459
pilT	Vibrio cholerae O1 biovar El Tor strain E7946	49.706	92.391	0.459
pilT	Neisseria meningitidis 8013	49.263	92.12	0.454
pilT	Neisseria gonorrhoeae MS11	48.968	92.12	0.451
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	44.571	95.109	0.424