Detailed information NTG0845261

Bioinformatically predicted

Overview

• Name: pilA/pilAI
• Type: Machinery gene
• Locus tag: QSG87_RS16000
• Genome accession: NZ_CP127923
• Coordinates: 3280672..3281094 (+)
• Length: 140 a.a.
• NCBI ID: WP_394357284.1
• Uniprot ID: -
• Organism: Acinetobacter chinensis strain SAAc573
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Genomic island	3282011..3295866	3280672..3281094	flank	917

Gene organization within MGE regions

Location: 3280672..3295866

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QSG87_RS16000 (QSG87_16005)	pilA/pilAI	3280672..3281094 (+)	423	WP_394357284.1	pilin	Machinery gene
QSG87_RS16005 (QSG87_16010)	-	3282011..3282433 (-)	423	WP_317023605.1	pilin	-
QSG87_RS16010 (QSG87_16015)	tfpZ	3283967..3284701 (+)	735	WP_317023606.1	TfpX/TfpZ family type IV pilin accessory protein	-
QSG87_RS16015 (QSG87_16020)	-	3284742..3286445 (+)	1704	WP_317023607.1	Wzy polymerase domain-containing protein	-
QSG87_RS16020 (QSG87_16025)	-	3286479..3287765 (-)	1287	WP_317023608.1	sugar transferase	-
QSG87_RS16025 (QSG87_16030)	-	3287809..3288618 (-)	810	WP_317023609.1	glycosyltransferase family 2 protein	-
QSG87_RS16030 (QSG87_16035)	-	3288620..3289510 (-)	891	WP_317023610.1	glycosyltransferase family 2 protein	-
QSG87_RS16035 (QSG87_16040)	-	3291190..3292173 (-)	984	WP_317023611.1	glycosyltransferase	-
QSG87_RS16040 (QSG87_16045)	-	3292334..3293584 (-)	1251	WP_317023612.1	O-antigen translocase	-
QSG87_RS16045 (QSG87_16050)	-	3293588..3294694 (-)	1107	WP_317023613.1	DegT/DnrJ/EryC1/StrS family aminotransferase	-
QSG87_RS16050 (QSG87_16055)	-	3294691..3295866 (-)	1176	WP_317023614.1	formyltransferase family protein	-

Sequence

Protein

• Length: 140 a.a.
• Molecular weight: 14558.67 Da
• Isoelectric Point: 8.0979

>NTDB_id=845261 QSG87_RS16000 WP_394357284.1 3280672..3281094(+) (pilA/pilAI) [Acinetobacter chinensis strain SAAc573]
MQKGFTLIELMIVVAIIGILAAIAIPAYQDYIAKSQATSGLAEINPAKTQYEVAVNEGKVPSTDASAAGYIGVPSMTRYC
EVSTTFASTTGVGTIACKLRNGNATKINDKTITLNRSTEGAWTCATGNGLDAKFKPGSCS

Nucleotide

• Length: 423 bp

>NTDB_id=845261 QSG87_RS16000 WP_394357284.1 3280672..3281094(+) (pilA/pilAI) [Acinetobacter chinensis strain SAAc573]
ATGCAAAAAGGTTTCACCTTGATCGAGCTCATGATTGTGGTAGCAATTATTGGTATTTTGGCAGCTATTGCGATTCCTGC
TTACCAGGACTATATTGCTAAATCACAAGCGACTTCTGGTCTGGCGGAAATTAACCCGGCTAAAACTCAATACGAAGTTG
CAGTAAATGAAGGTAAAGTACCTTCCACTGATGCTTCTGCTGCAGGCTATATTGGTGTGCCTTCTATGACTCGTTATTGT
GAAGTTAGTACAACTTTTGCTTCAACTACAGGTGTAGGTACAATTGCTTGTAAATTACGAAACGGTAATGCAACGAAGAT
TAATGATAAAACCATTACTTTAAATCGTAGTACTGAAGGTGCATGGACTTGTGCAACTGGTAATGGCTTAGACGCTAAAT
TTAAACCAGGTTCTTGTTCTTAA

Domains

Predicted by InterproScan.

• Pilin (bacterial filament) (Pilin) (33-139)

• Prokaryotic N-terminal methylation motif (N_methyl) (2-24)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA/pilAI	Pseudomonas stutzeri DSM 10701	58.571	100	0.586
pilA	Acinetobacter baumannii strain A118	54.676	99.286	0.543
pilA/pilAII	Pseudomonas stutzeri DSM 10701	51.825	97.857	0.507
pilA2	Legionella pneumophila strain ERS1305867	48.201	99.286	0.479
pilA2	Legionella pneumophila str. Paris	47.482	99.286	0.471
pilA	Pseudomonas aeruginosa PAK	41.558	100	0.457
comP	Acinetobacter baylyi ADP1	41.06	100	0.443
pilE	Neisseria gonorrhoeae strain FA1090	36.257	100	0.443
pilE	Neisseria gonorrhoeae MS11	36.875	100	0.421
pilA/pilA1	Eikenella corrodens VA1	39.189	100	0.414
pilA	Vibrio cholerae C6706	40.141	100	0.407
pilA	Vibrio cholerae strain A1552	40.141	100	0.407
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	40.141	100	0.407