Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX   Type   Regulator
Locus tag   P7Y79_RS07900 Genome accession   NZ_CP121207
Coordinates   1631796..1632272 (-) Length   158 a.a.
NCBI ID   WP_074870065.1    Uniprot ID   -
Organism   Streptococcus ruminicola strain CNU_77-47     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1626796..1637272
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P7Y79_RS07875 (P7Y79_07875) - 1627706..1628296 (-) 591 WP_093816026.1 glucosaminidase domain-containing protein -
  P7Y79_RS07880 (P7Y79_07880) - 1628293..1629069 (-) 777 WP_093816024.1 D-alanyl-D-alanine carboxypeptidase family protein -
  P7Y79_RS07885 (P7Y79_07885) - 1629053..1629757 (-) 705 WP_158913158.1 histidine phosphatase family protein -
  P7Y79_RS07890 (P7Y79_07890) - 1629987..1631324 (-) 1338 WP_006531013.1 PFL family protein -
  P7Y79_RS07895 (P7Y79_07895) - 1631336..1631602 (-) 267 WP_039696002.1 ACT domain-containing protein -
  P7Y79_RS07900 (P7Y79_07900) comX/sigX 1631796..1632272 (-) 477 WP_074870065.1 sigma-70 family RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 19415.29 Da        Isoelectric Point: 9.6123

>NTDB_id=811120 P7Y79_RS07900 WP_074870065.1 1631796..1632272(-) (comX/sigX) [Streptococcus ruminicola strain CNU_77-47]
MDFERYFQTVKPIILKLRRHYFVKLWDYEDWIQEGRIVFFQLLEEHPDLLINEGKRYSYFKTKFSNHVKDTIRHQESFKR
KFNRMPYEEIGDISHCVPQVSFFEVADYVAYQDSLARLRRTLGREDRLKLEKVIRGERFEGKKAFLKSIEPYFSDFRP

Nucleotide


Download         Length: 477 bp        

>NTDB_id=811120 P7Y79_RS07900 WP_074870065.1 1631796..1632272(-) (comX/sigX) [Streptococcus ruminicola strain CNU_77-47]
GTGGATTTTGAACGCTATTTTCAAACGGTTAAACCAATTATTTTAAAATTACGCCGTCATTATTTTGTCAAACTTTGGGA
TTATGAAGATTGGATTCAAGAAGGTCGAATTGTTTTCTTTCAACTCTTAGAGGAGCATCCAGACCTCTTAATTAATGAAG
GCAAACGTTATAGTTACTTTAAAACAAAGTTTTCTAACCATGTTAAAGATACTATCCGCCATCAGGAATCCTTTAAACGG
AAATTTAATCGTATGCCTTATGAAGAAATTGGTGATATTAGTCACTGTGTGCCCCAGGTATCTTTCTTTGAAGTCGCAGA
TTACGTGGCTTATCAGGATAGCTTAGCACGTTTACGAAGAACATTGGGAAGAGAAGACAGACTAAAGTTGGAAAAAGTGA
TTCGTGGGGAACGTTTTGAAGGGAAGAAAGCCTTTTTAAAAAGCATTGAACCGTATTTCTCAGATTTTAGACCATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.