Detailed information NTG0681739

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: M1F45_RS08625
• Genome accession: NZ_CP096540
• Coordinates: 1728569..1728880 (-)
• Length: 103 a.a.
• NCBI ID: WP_000472256.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain RIVM_M044329
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1723569..1733880

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M1F45_RS08590 (M1F45_08575)	gcvPA	1724071..1725417 (-)	1347	WP_021285939.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
M1F45_RS08595 (M1F45_08580)	gcvT	1725437..1726528 (-)	1092	WP_000093349.1	glycine cleavage system aminomethyltransferase GcvT	-
M1F45_RS08600 (M1F45_08585)	-	1726687..1727211 (-)	525	WP_001015120.1	shikimate kinase	-
M1F45_RS08605 (M1F45_08590)	-	1727201..1727347 (-)	147	WP_001789879.1	hypothetical protein	-
M1F45_RS08610 (M1F45_08595)	comGF	1727444..1727941 (-)	498	WP_001825340.1	competence type IV pilus minor pilin ComGF	Machinery gene
M1F45_RS08615 (M1F45_08600)	comGE	1727859..1728158 (-)	300	WP_000844413.1	hypothetical protein	Machinery gene
M1F45_RS08620 (M1F45_08605)	comGD	1728145..1728591 (-)	447	WP_001796473.1	competence type IV pilus minor pilin ComGD	Machinery gene
M1F45_RS08625 (M1F45_08610)	comGC	1728569..1728880 (-)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
M1F45_RS08630 (M1F45_08615)	comGB	1728894..1729964 (-)	1071	WP_000776425.1	competence type IV pilus assembly protein ComGB	Machinery gene
M1F45_RS08635 (M1F45_08620)	comGA	1729936..1730910 (-)	975	WP_000697220.1	competence type IV pilus ATPase ComGA	Machinery gene
M1F45_RS08640 (M1F45_08625)	-	1730962..1731585 (-)	624	WP_021285938.1	MBL fold metallo-hydrolase	-
M1F45_RS08645 (M1F45_08630)	-	1731582..1731911 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
M1F45_RS08650 (M1F45_08635)	-	1731911..1732897 (-)	987	WP_000161315.1	ROK family glucokinase	-
M1F45_RS08655 (M1F45_08640)	-	1732894..1733097 (-)	204	WP_000087559.1	YqgQ family protein	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11315.36 Da
• Isoelectric Point: 8.5268

>NTDB_id=681739 M1F45_RS08625 WP_000472256.1 1728569..1728880(-) (comGC) [Staphylococcus aureus strain RIVM_M044329]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=681739 M1F45_RS08625 WP_000472256.1 1728569..1728880(-) (comGC) [Staphylococcus aureus strain RIVM_M044329]
ATGTTTAAATTTCTAAAAAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTATTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	100	100	1
comGC	Staphylococcus aureus N315	100	100	1
comGC/cglC	Streptococcus pneumoniae TIGR4	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae Rx1	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae D39	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae R6	46.078	99.029	0.456
comGC/cglC	Streptococcus mitis SK321	51.163	83.495	0.427
comGC/cglC	Streptococcus mitis NCTC 12261	51.163	83.495	0.427
comYC	Streptococcus gordonii str. Challis substr. CH1	42.857	95.146	0.408
comYC	Streptococcus suis isolate S10	50	75.728	0.379
comGC	Bacillus subtilis subsp. subtilis str. 168	41.758	88.35	0.369
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	79.612	0.369