Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | M1F45_RS08615 | Genome accession | NZ_CP096540 |
| Coordinates | 1727859..1728158 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain RIVM_M044329 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1722859..1733158
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M1F45_RS08590 (M1F45_08575) | gcvPA | 1724071..1725417 (-) | 1347 | WP_021285939.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| M1F45_RS08595 (M1F45_08580) | gcvT | 1725437..1726528 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| M1F45_RS08600 (M1F45_08585) | - | 1726687..1727211 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| M1F45_RS08605 (M1F45_08590) | - | 1727201..1727347 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| M1F45_RS08610 (M1F45_08595) | comGF | 1727444..1727941 (-) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| M1F45_RS08615 (M1F45_08600) | comGE | 1727859..1728158 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| M1F45_RS08620 (M1F45_08605) | comGD | 1728145..1728591 (-) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| M1F45_RS08625 (M1F45_08610) | comGC | 1728569..1728880 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| M1F45_RS08630 (M1F45_08615) | comGB | 1728894..1729964 (-) | 1071 | WP_000776425.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| M1F45_RS08635 (M1F45_08620) | comGA | 1729936..1730910 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| M1F45_RS08640 (M1F45_08625) | - | 1730962..1731585 (-) | 624 | WP_021285938.1 | MBL fold metallo-hydrolase | - |
| M1F45_RS08645 (M1F45_08630) | - | 1731582..1731911 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| M1F45_RS08650 (M1F45_08635) | - | 1731911..1732897 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| M1F45_RS08655 (M1F45_08640) | - | 1732894..1733097 (-) | 204 | WP_000087559.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=681737 M1F45_RS08615 WP_000844413.1 1727859..1728158(-) (comGE) [Staphylococcus aureus strain RIVM_M044329]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=681737 M1F45_RS08615 WP_000844413.1 1727859..1728158(-) (comGE) [Staphylococcus aureus strain RIVM_M044329]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |