Detailed information NTG0677026

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: MU520_RS09450
• Genome accession: NZ_CP095463
• Coordinates: 1952410..1952691 (-)
• Length: 93 a.a.
• NCBI ID: WP_011921720.1
• Uniprot ID: A0A0M9FL05
• Organism: Streptococcus suis strain TJS56
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1947410..1957691

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MU520_RS09415	-	1947835..1948386 (-)	552	WP_012774908.1	folate family ECF transporter S component	-
MU520_RS09420	-	1948701..1949888 (-)	1188	WP_012775422.1	acetate kinase	-
MU520_RS09425	comYH	1949938..1950891 (-)	954	WP_011922562.1	class I SAM-dependent methyltransferase	Machinery gene
MU520_RS09430	comGG	1950948..1951358 (-)	411	WP_011921724.1	competence type IV pilus minor pilin ComGG	-
MU520_RS09435	comGF/cglF	1951336..1951770 (-)	435	WP_011922561.1	competence type IV pilus minor pilin ComGF	Machinery gene
MU520_RS09440	comYE	1951757..1952050 (-)	294	WP_011921722.1	competence type IV pilus minor pilin ComGE	Machinery gene
MU520_RS09445	comGD	1952022..1952429 (-)	408	WP_011921721.1	competence type IV pilus minor pilin ComGD	-
MU520_RS09450	comYC	1952410..1952691 (-)	282	WP_011921720.1	competence type IV pilus major pilin ComGC	Machinery gene
MU520_RS09455	comYB	1952693..1953730 (-)	1038	WP_011921719.1	competence type IV pilus assembly protein ComGB	Machinery gene
MU520_RS09460	comYA	1953642..1954592 (-)	951	WP_011921718.1	competence type IV pilus ATPase ComGA	Machinery gene
MU520_RS09465	-	1954678..1955621 (+)	944	Protein_1854	S66 peptidase family protein	-
MU520_RS09470	-	1955656..1956021 (-)	366	WP_002936568.1	DUF1033 family protein	-

Sequence

Protein

• Length: 93 a.a.
• Molecular weight: 10408.34 Da
• Isoelectric Point: 7.0117

>NTDB_id=677026 MU520_RS09450 WP_011921720.1 1952410..1952691(-) (comYC) [Streptococcus suis strain TJS56]
MKKLVEMKVKGFTLVEMLVVLGIISLLLLLFVPNLSQQKDAIQKKGDAAVVKVVESQMELYELEHDEEATVADLQAKGYI
TEKQAKQYATAKK

Nucleotide

• Length: 282 bp

>NTDB_id=677026 MU520_RS09450 WP_011921720.1 1952410..1952691(-) (comYC) [Streptococcus suis strain TJS56]
ATGAAAAAATTAGTTGAAATGAAGGTAAAAGGGTTCACTCTGGTGGAAATGTTGGTCGTTTTAGGGATCATTAGCCTGCT
CTTGCTCCTCTTTGTGCCAAATTTGAGCCAGCAGAAGGATGCTATTCAGAAGAAGGGGGATGCGGCTGTTGTCAAAGTAG
TGGAGAGTCAGATGGAGCTCTATGAATTGGAACATGACGAGGAAGCAACGGTGGCAGATTTGCAGGCGAAAGGTTATATT
ACTGAAAAACAAGCAAAACAGTATGCTACGGCGAAAAAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (8-30)

3D structure

• AlphaFold DB: A0A0M9FL05

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus suis isolate S10	100	100	1
comGC/cglC	Streptococcus mitis SK321	68.235	91.398	0.624
comGC/cglC	Streptococcus mitis NCTC 12261	68.235	91.398	0.624
comGC/cglC	Streptococcus pneumoniae D39	70.37	87.097	0.613
comGC/cglC	Streptococcus pneumoniae R6	70.37	87.097	0.613
comGC/cglC	Streptococcus pneumoniae TIGR4	70.37	87.097	0.613
comGC/cglC	Streptococcus pneumoniae Rx1	70.37	87.097	0.613
comYC	Streptococcus gordonii str. Challis substr. CH1	61.798	95.699	0.591
comYC	Streptococcus mutans UA140	60.227	94.624	0.57
comYC	Streptococcus mutans UA159	60.227	94.624	0.57
comGC	Lactococcus lactis subsp. cremoris KW2	56.818	94.624	0.538
comGC	Staphylococcus aureus N315	50	83.871	0.419
comGC	Staphylococcus aureus MW2	50	83.871	0.419
comGC	Bacillus subtilis subsp. subtilis str. 168	49.333	80.645	0.398
comGC	Latilactobacillus sakei subsp. sakei 23K	43.75	86.022	0.376