NTDB

Overview

Name	pilE	Type	Machinery gene
Locus tag	LU301_RS01330	Genome accession	NZ_CP089978
Coordinates	265021..265461 (+)	Length	146 a.a.
NCBI ID	WP_305271796.1	Uniprot ID	-
Organism	Moraxella sp. ZY210820
Function	assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 260021..270461

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LU301_RS01295 (LU301_01290)	-	260902..261558 (+)	657	WP_305271786.1	response regulator transcription factor	-
LU301_RS01300 (LU301_01295)	-	261555..262838 (+)	1284	WP_305271788.1	HAMP domain-containing sensor histidine kinase	-
LU301_RS01305 (LU301_01300)	-	262841..263014 (+)	174	WP_305271790.1	hypothetical protein	-
LU301_RS01310 (LU301_01305)	-	263122..263364 (+)	243	WP_305271792.1	hypothetical protein	-
LU301_RS01315 (LU301_01310)	-	263538..263726 (+)	189	WP_305271794.1	hypothetical protein	-
LU301_RS12040	-	263864..264375 (-)	512	Protein_252	IS630 family transposase	-
LU301_RS01325 (LU301_01320)	-	264359..264670 (-)	312	WP_370692232.1	IS630 transposase-related protein	-
LU301_RS01330 (LU301_01325)	pilE	265021..265461 (+)	441	WP_305271796.1	pilin	Machinery gene
LU301_RS01335 (LU301_01330)	-	265584..269270 (+)	3687	WP_305271799.1	phosphatase PAP2 family protein	-
LU301_RS01340 (LU301_01335)	tfpZ	269338..270081 (+)	744	WP_305271801.1	TfpX/TfpZ family type IV pilin accessory protein	-

Sequence

Protein

Download Length: 146 a.a. Molecular weight: 15138.47 Da Isoelectric Point: 9.0420

                                >NTDB_id=639618 LU301_RS01330 WP_305271796.1 265021..265461(+) (pilE) [Moraxella sp. ZY210820]

MNTMQKGFTLIELMIVIAIIGILAAIALPAYQDYIARTQMTEAMNLAGGQKSAVTEFHADKGAFPTSNLEAGIAAASNIK

GKYVASVGIGASGVITATMQSANISKDIQGKTLTLTPTALTSASGSYEWKCASNASNKFLPATCRS

Nucleotide

Download Length: 441 bp

                                >NTDB_id=639618 LU301_RS01330 WP_305271796.1 265021..265461(+) (pilE) [Moraxella sp. ZY210820]

ATGAATACTATGCAAAAAGGTTTTACCTTAATCGAATTAATGATCGTAATCGCTATTATCGGTATCTTAGCTGCGATTGC

TTTACCAGCTTACCAAGACTACATCGCTCGTACACAAATGACTGAAGCAATGAACCTAGCTGGTGGTCAAAAGTCAGCAG

TAACTGAATTCCATGCTGACAAAGGTGCATTCCCTACTTCTAACTTAGAAGCCGGTATTGCAGCAGCAAGTAACATTAAA

GGTAAATATGTTGCTAGTGTTGGGATTGGTGCTAGCGGTGTTATCACTGCAACTATGCAATCTGCTAATATCTCTAAAGA

TATTCAAGGTAAGACACTTACTTTGACCCCAACTGCATTGACTTCTGCTTCTGGTTCTTATGAGTGGAAATGTGCTTCTA

ACGCTTCTAACAAGTTCCTTCCAGCAACTTGTCGCTCTTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(4-28)

Pilin (bacterial filament) (Pilin)

(36-145)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
pilE	Neisseria gonorrhoeae strain FA1090	53.374	100	0.596
pilE	Neisseria gonorrhoeae MS11	49.39	100	0.555
pilA/pilA1	Eikenella corrodens VA1	44.231	100	0.473
pilA2	Legionella pneumophila strain ERS1305867	46.207	99.315	0.459
pilA2	Legionella pneumophila str. Paris	46.479	97.26	0.452
pilA	Ralstonia pseudosolanacearum GMI1000	38.788	100	0.438
pilA	Vibrio campbellii strain DS40M4	45.324	95.205	0.432
pilE	Neisseria elongata subsp. glycolytica ATCC 29315	38.182	100	0.432
comP	Acinetobacter baylyi ADP1	41.176	100	0.432
pilA	Pseudomonas aeruginosa PAK	39.744	100	0.425
pilA/pilAI	Pseudomonas stutzeri DSM 10701	40.411	100	0.404
pilA	Acinetobacter baumannii strain A118	39.583	98.63	0.39
pilA/pilAII	Pseudomonas stutzeri DSM 10701	38.889	98.63	0.384

Detailed information NTG0639618