Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   NOV99_RS05425 Genome accession   NZ_CP101844
Coordinates   1086109..1086288 (-) Length   59 a.a.
NCBI ID   WP_024390773.1    Uniprot ID   -
Organism   Streptococcus suis strain 2018WUSS151     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1081109..1091288
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NOV99_RS05400 (NOV99_05400) - 1082765..1083139 (+) 375 WP_002935537.1 GntR family transcriptional regulator -
  NOV99_RS05405 (NOV99_05405) - 1083132..1083839 (+) 708 WP_002935539.1 ABC transporter ATP-binding protein -
  NOV99_RS05410 (NOV99_05410) - 1083856..1084638 (+) 783 WP_002935541.1 hypothetical protein -
  NOV99_RS05415 (NOV99_05415) add 1084682..1085683 (-) 1002 WP_002935542.1 adenosine deaminase -
  NOV99_RS05425 (NOV99_05425) prx 1086109..1086288 (-) 180 WP_024390773.1 hypothetical protein Regulator
  NOV99_RS05430 (NOV99_05430) - 1086656..1087858 (+) 1203 WP_002935596.1 IS110 family transposase -
  NOV99_RS05435 (NOV99_05435) - 1088073..1088810 (-) 738 WP_240020812.1 PlySs2 family phage lysin -
  NOV99_RS05440 (NOV99_05440) - 1088794..1089144 (-) 351 WP_002937841.1 phage holin -
  NOV99_RS05445 (NOV99_05445) - 1089147..1089446 (-) 300 WP_014636661.1 hypothetical protein -
  NOV99_RS05450 (NOV99_05450) - 1089450..1089794 (-) 345 WP_002937844.1 hypothetical protein -
  NOV99_RS05455 (NOV99_05455) - 1089797..1090015 (-) 219 WP_002937846.1 hypothetical protein -

Sequence

Protein


Download         Length: 59 a.a.        Molecular weight: 6725.69 Da        Isoelectric Point: 3.8954

>NTDB_id=611892 NOV99_RS05425 WP_024390773.1 1086109..1086288(-) (prx) [Streptococcus suis strain 2018WUSS151]
MTEVQVIFEEAIENGWFGEMVTVVRRDGEIFDFVLPGESVRPWEVVSVEKLADVIGELK

Nucleotide


Download         Length: 180 bp        

>NTDB_id=611892 NOV99_RS05425 WP_024390773.1 1086109..1086288(-) (prx) [Streptococcus suis strain 2018WUSS151]
ATGACAGAAGTACAAGTAATTTTCGAAGAAGCAATTGAAAACGGGTGGTTTGGCGAAATGGTAACGGTCGTTCGTCGTGA
TGGTGAAATATTCGATTTTGTCTTACCAGGCGAGTCAGTCAGACCTTGGGAAGTGGTAAGCGTGGAGAAGTTAGCGGATG
TGATAGGGGAATTAAAATGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

51.923

88.136

0.458
  prx Streptococcus pyogenes MGAS315

50

88.136

0.441
  prx Streptococcus pyogenes MGAS315

46.154

88.136

0.407
  prx Streptococcus pyogenes MGAS315

42.308

88.136

0.373