Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | PCA10_RS04780 | Genome accession | NC_021499 |
| Coordinates | 1028411..1028857 (+) | Length | 148 a.a. |
| NCBI ID | WP_016490898.1 | Uniprot ID | - |
| Organism | Metapseudomonas resinovorans NBRC 106553 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1023411..1033857
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PCA10_RS04755 (PCA10_09590) | yacG | 1023533..1023733 (-) | 201 | WP_016490893.1 | DNA gyrase inhibitor YacG | - |
| PCA10_RS04760 (PCA10_09600) | coaE | 1023730..1024341 (-) | 612 | WP_016490894.1 | dephospho-CoA kinase | - |
| PCA10_RS04765 (PCA10_09610) | pilD | 1024338..1025210 (-) | 873 | WP_016490895.1 | A24 family peptidase | Machinery gene |
| PCA10_RS04770 (PCA10_09620) | pilC | 1025213..1026430 (-) | 1218 | WP_016490896.1 | type II secretion system F family protein | Machinery gene |
| PCA10_RS04775 (PCA10_09630) | pilB | 1026433..1028139 (-) | 1707 | WP_016490897.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| PCA10_RS04780 (PCA10_09640) | pilA2 | 1028411..1028857 (+) | 447 | WP_016490898.1 | pilin | Machinery gene |
| PCA10_RS04785 (PCA10_09650) | - | 1028913..1030628 (+) | 1716 | WP_041770137.1 | PglL family O-oligosaccharyltransferase | - |
| PCA10_RS04795 (PCA10_09660) | nadC | 1030831..1031679 (-) | 849 | WP_016490900.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
Sequence
Protein
Download Length: 148 a.a. Molecular weight: 15148.31 Da Isoelectric Point: 7.7869
>NTDB_id=59197 PCA10_RS04780 WP_016490898.1 1028411..1028857(+) (pilA2) [Metapseudomonas resinovorans NBRC 106553]
MKAQKGFTLIELMIVVAIIGILAAIAIPAYQDYTVRARVTEGLNLAASAKTTVAENAMSATSPLDAGWSQPAPTTNVDSV
AVNPANGEITITYTDAAGGTNGTLNTIIMVPRSSSVALQGGVAPGGAVTWTCNTGSLPARFRPANCRQ
MKAQKGFTLIELMIVVAIIGILAAIAIPAYQDYTVRARVTEGLNLAASAKTTVAENAMSATSPLDAGWSQPAPTTNVDSV
AVNPANGEITITYTDAAGGTNGTLNTIIMVPRSSSVALQGGVAPGGAVTWTCNTGSLPARFRPANCRQ
Nucleotide
Download Length: 447 bp
>NTDB_id=59197 PCA10_RS04780 WP_016490898.1 1028411..1028857(+) (pilA2) [Metapseudomonas resinovorans NBRC 106553]
ATGAAAGCACAAAAGGGTTTTACTCTGATTGAGCTGATGATCGTTGTAGCGATCATCGGCATTCTGGCTGCAATCGCCAT
CCCGGCCTACCAGGACTACACCGTTCGCGCGCGCGTTACCGAAGGTCTGAACCTGGCCGCTTCCGCCAAGACCACCGTGG
CGGAGAACGCCATGTCCGCTACCAGCCCGCTGGATGCCGGTTGGTCGCAGCCGGCTCCGACCACCAACGTTGATTCCGTT
GCCGTGAACCCTGCGAACGGTGAAATCACCATCACCTACACCGATGCTGCTGGCGGCACTAACGGCACCCTCAACACCAT
TATCATGGTTCCTCGGAGCAGTAGCGTTGCCCTGCAAGGTGGCGTTGCTCCGGGCGGGGCTGTTACCTGGACTTGCAATA
CTGGCTCGCTTCCGGCTCGCTTCCGTCCCGCCAACTGCCGTCAATAA
ATGAAAGCACAAAAGGGTTTTACTCTGATTGAGCTGATGATCGTTGTAGCGATCATCGGCATTCTGGCTGCAATCGCCAT
CCCGGCCTACCAGGACTACACCGTTCGCGCGCGCGTTACCGAAGGTCTGAACCTGGCCGCTTCCGCCAAGACCACCGTGG
CGGAGAACGCCATGTCCGCTACCAGCCCGCTGGATGCCGGTTGGTCGCAGCCGGCTCCGACCACCAACGTTGATTCCGTT
GCCGTGAACCCTGCGAACGGTGAAATCACCATCACCTACACCGATGCTGCTGGCGGCACTAACGGCACCCTCAACACCAT
TATCATGGTTCCTCGGAGCAGTAGCGTTGCCCTGCAAGGTGGCGTTGCTCCGGGCGGGGCTGTTACCTGGACTTGCAATA
CTGGCTCGCTTCCGGCTCGCTTCCGTCCCGCCAACTGCCGTCAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila strain ERS1305867 |
61.745 |
100 |
0.622 |
| pilA2 | Legionella pneumophila str. Paris |
61.074 |
100 |
0.615 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
52.439 |
100 |
0.581 |
| comP | Acinetobacter baylyi ADP1 |
48.148 |
100 |
0.527 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
37.056 |
100 |
0.493 |
| pilA/pilA1 | Eikenella corrodens VA1 |
38.323 |
100 |
0.432 |
| pilA | Pseudomonas aeruginosa PAK |
36.471 |
100 |
0.419 |
| pilA | Acinetobacter baumannii strain A118 |
38.961 |
100 |
0.405 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
38.961 |
100 |
0.405 |
| pilA | Haemophilus influenzae Rd KW20 |
37.241 |
97.973 |
0.365 |