Detailed information NTG0586246

Bioinformatically predicted

Overview

• Name: comGC/cglC
• Type: Machinery gene
• Locus tag: KV238_RS02800
• Genome accession: NZ_CP078012
• Coordinates: 577105..577428 (-)
• Length: 107 a.a.
• NCBI ID: WP_115250221.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain SEZ_18-036
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 572105..582428

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KV238_RS02765 (KV238_02760)	-	572434..573048 (+)	615	WP_021320266.1	hypothetical protein	-
KV238_RS02770 (KV238_02765)	-	573417..574619 (-)	1203	WP_126436211.1	acetate kinase	-
KV238_RS02775 (KV238_02770)	comYH	574679..575632 (-)	954	WP_165627046.1	class I SAM-dependent methyltransferase	Machinery gene
KV238_RS02780 (KV238_02775)	comGG	575694..576056 (-)	363	WP_012677238.1	competence type IV pilus minor pilin ComGG	-
KV238_RS02785 (KV238_02780)	comYF	576034..576468 (-)	435	WP_014622144.1	competence type IV pilus minor pilin ComGF	Machinery gene
KV238_RS02790 (KV238_02785)	comGE	576455..576745 (-)	291	WP_230923802.1	competence type IV pilus minor pilin ComGE	-
KV238_RS02795 (KV238_02790)	comGD	576702..577127 (-)	426	WP_042669821.1	competence type IV pilus minor pilin ComGD	-
KV238_RS02800 (KV238_02795)	comGC/cglC	577105..577428 (-)	324	WP_115250221.1	competence type IV pilus major pilin ComGC	Machinery gene
KV238_RS02805 (KV238_02800)	comYB	577429..578463 (-)	1035	WP_230923946.1	competence type IV pilus assembly protein ComGB	Machinery gene
KV238_RS02810 (KV238_02805)	comGA/cglA	578396..579334 (-)	939	WP_230923803.1	competence type IV pilus ATPase ComGA	Machinery gene
KV238_RS02815 (KV238_02810)	-	579515..580162 (-)	648	WP_230923804.1	ABC transporter ATP-binding protein	-
KV238_RS02820 (KV238_02815)	-	580164..582167 (-)	2004	Protein_522	DUF1430 domain-containing protein	-

Sequence

Protein

• Length: 107 a.a.
• Molecular weight: 12179.22 Da
• Isoelectric Point: 8.4057

>NTDB_id=586246 KV238_RS02800 WP_115250221.1 577105..577428(-) (comGC/cglC) [Streptococcus equi subsp. zooepidemicus strain SEZ_18-036]
MKMRLSILKDQGVQAFTLLEMLLVLLIISVLMLLFVPNLSKQKDKVTDTGNAAVVKLVENQAELYELSHGEKPSLKQLQE
DGSISDKQQKAYQDYYAKHKDETKKLN

Nucleotide

• Length: 324 bp

>NTDB_id=586246 KV238_RS02800 WP_115250221.1 577105..577428(-) (comGC/cglC) [Streptococcus equi subsp. zooepidemicus strain SEZ_18-036]
ATGAAAATGAGATTATCAATCTTAAAAGATCAAGGTGTTCAGGCCTTCACTTTACTGGAAATGCTTCTGGTTTTGTTAAT
CATTAGTGTTTTGATGCTGTTATTTGTTCCAAATTTAAGTAAACAAAAGGATAAGGTGACAGACACAGGCAATGCTGCGG
TGGTAAAGCTAGTTGAAAATCAGGCAGAGCTTTATGAATTATCACATGGGGAAAAGCCAAGCCTGAAGCAACTGCAAGAG
GATGGAAGCATCAGTGACAAGCAACAAAAGGCTTATCAGGATTATTATGCAAAGCATAAAGATGAAACTAAGAAGCTCAA
TTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (14-34)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC/cglC	Streptococcus mitis SK321	59.813	100	0.598
comGC/cglC	Streptococcus pneumoniae Rx1	57.944	100	0.579
comGC/cglC	Streptococcus pneumoniae D39	57.944	100	0.579
comGC/cglC	Streptococcus pneumoniae R6	57.944	100	0.579
comGC/cglC	Streptococcus pneumoniae TIGR4	57.944	100	0.579
comYC	Streptococcus gordonii str. Challis substr. CH1	62	93.458	0.579
comGC/cglC	Streptococcus mitis NCTC 12261	61.616	92.523	0.57
comYC	Streptococcus mutans UA140	59.794	90.654	0.542
comYC	Streptococcus mutans UA159	59.794	90.654	0.542
comGC	Lactococcus lactis subsp. cremoris KW2	56.842	88.785	0.505
comYC	Streptococcus suis isolate S10	60	74.766	0.449
comGC	Staphylococcus aureus MW2	50	72.897	0.364
comGC	Staphylococcus aureus N315	50	72.897	0.364