Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | AZKH_RS19430 | Genome accession | NC_020516 |
| Coordinates | 4348237..4348662 (+) | Length | 141 a.a. |
| NCBI ID | WP_015437506.1 | Uniprot ID | H0PUD0 |
| Organism | Azoarcus sp. KH32C | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4343237..4353662
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AZKH_RS19425 (AZKH_3919) | - | 4344307..4347471 (+) | 3165 | WP_015437505.1 | efflux RND transporter permease subunit | - |
| AZKH_RS19430 (AZKH_3920) | pilA2 | 4348237..4348662 (+) | 426 | WP_015437506.1 | pilin | Machinery gene |
| AZKH_RS19435 (AZKH_3921) | - | 4348727..4349062 (+) | 336 | WP_015437507.1 | hypothetical protein | - |
| AZKH_RS26415 (AZKH_3922) | - | 4349127..4352069 (+) | 2943 | WP_083903104.1 | glycosyltransferase | - |
| AZKH_RS19445 (AZKH_3923) | - | 4352178..4352957 (+) | 780 | WP_015437509.1 | TylF/MycF/NovP-related O-methyltransferase | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 14044.28 Da Isoelectric Point: 8.4883
>NTDB_id=56724 AZKH_RS19430 WP_015437506.1 4348237..4348662(+) (pilA2) [Azoarcus sp. KH32C]
MKKIQQGFTLIELMIVVAIIGILAAVALPAYQNYTIRAKVSELVLAASGARTCITEVYQSVGGATIPTTVAADCAVSTVG
KVTGATVSTGGVVTVTGTTATSSVGAAVTITLTPTVQSAAGTLTWACSGSDTKYVPASCRG
MKKIQQGFTLIELMIVVAIIGILAAVALPAYQNYTIRAKVSELVLAASGARTCITEVYQSVGGATIPTTVAADCAVSTVG
KVTGATVSTGGVVTVTGTTATSSVGAAVTITLTPTVQSAAGTLTWACSGSDTKYVPASCRG
Nucleotide
Download Length: 426 bp
>NTDB_id=56724 AZKH_RS19430 WP_015437506.1 4348237..4348662(+) (pilA2) [Azoarcus sp. KH32C]
ATGAAAAAGATCCAACAAGGCTTTACCCTCATCGAACTGATGATCGTCGTCGCGATCATCGGCATTCTGGCCGCCGTCGC
GCTGCCGGCTTACCAGAACTACACGATCCGGGCCAAGGTTTCGGAACTGGTGCTGGCCGCCAGCGGCGCGCGCACCTGCA
TCACCGAGGTTTACCAGTCGGTCGGGGGAGCGACGATCCCAACGACGGTTGCAGCGGACTGCGCAGTCTCGACCGTCGGC
AAGGTAACCGGTGCGACGGTGTCGACTGGTGGGGTCGTCACGGTCACGGGCACTACTGCCACAAGCTCCGTGGGCGCGGC
CGTGACCATCACCCTGACGCCGACAGTCCAGTCGGCCGCAGGCACCCTGACCTGGGCTTGCTCGGGCTCCGACACCAAGT
ACGTCCCGGCCTCCTGCCGCGGCTAA
ATGAAAAAGATCCAACAAGGCTTTACCCTCATCGAACTGATGATCGTCGTCGCGATCATCGGCATTCTGGCCGCCGTCGC
GCTGCCGGCTTACCAGAACTACACGATCCGGGCCAAGGTTTCGGAACTGGTGCTGGCCGCCAGCGGCGCGCGCACCTGCA
TCACCGAGGTTTACCAGTCGGTCGGGGGAGCGACGATCCCAACGACGGTTGCAGCGGACTGCGCAGTCTCGACCGTCGGC
AAGGTAACCGGTGCGACGGTGTCGACTGGTGGGGTCGTCACGGTCACGGGCACTACTGCCACAAGCTCCGTGGGCGCGGC
CGTGACCATCACCCTGACGCCGACAGTCCAGTCGGCCGCAGGCACCCTGACCTGGGCTTGCTCGGGCTCCGACACCAAGT
ACGTCCCGGCCTCCTGCCGCGGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
48.571 |
99.291 |
0.482 |
| comP | Acinetobacter baylyi ADP1 |
44.667 |
100 |
0.475 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
47.857 |
99.291 |
0.475 |
| pilA/pilA1 | Eikenella corrodens VA1 |
40.26 |
100 |
0.44 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
38.75 |
100 |
0.44 |
| pilE | Neisseria gonorrhoeae MS11 |
38.509 |
100 |
0.44 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
35.503 |
100 |
0.426 |
| pilA | Acinetobacter baumannii strain A118 |
38.514 |
100 |
0.404 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
42.636 |
91.489 |
0.39 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
36.242 |
100 |
0.383 |
| pilA | Glaesserella parasuis strain SC1401 |
35.526 |
100 |
0.383 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
34.211 |
100 |
0.369 |
| pilA | Pseudomonas aeruginosa PAK |
33.548 |
100 |
0.369 |