Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX   Type   Regulator
Locus tag   I6J15_RS01450 Genome accession   NZ_CP068056
Coordinates   289006..289482 (-) Length   158 a.a.
NCBI ID   WP_111712607.1    Uniprot ID   -
Organism   Streptococcus lutetiensis strain FDAARGOS_1158     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 284006..294482
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J15_RS01420 (I6J15_01420) - 284084..284308 (-) 225 WP_020916227.1 acyl carrier protein -
  I6J15_RS01425 (I6J15_01425) - 284369..285343 (-) 975 WP_020916226.1 beta-ketoacyl-ACP synthase III -
  I6J15_RS01430 (I6J15_01430) - 285346..285780 (-) 435 WP_039695988.1 MarR family winged helix-turn-helix transcriptional regulator -
  I6J15_RS01435 (I6J15_01435) - 285896..286684 (-) 789 WP_111712630.1 enoyl-CoA hydratase -
  I6J15_RS01440 (I6J15_01440) - 286875..287522 (-) 648 WP_111712629.1 HAD family hydrolase -
  I6J15_RS01445 (I6J15_01445) - 287619..288977 (+) 1359 WP_020916223.1 aspartate kinase -
  I6J15_RS01450 (I6J15_01450) comX/sigX 289006..289482 (-) 477 WP_111712607.1 sigma-70 family RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 19479.33 Da        Isoelectric Point: 8.6905

>NTDB_id=526655 I6J15_RS01450 WP_111712607.1 289006..289482(-) (comX/sigX) [Streptococcus lutetiensis strain FDAARGOS_1158]
MDFERYFQTVKPIILKLRRYYFVKLWDYEDWIQEGRIIFFELVEEHPDLLINEGKRYSYFKTKFSNHVKDIIRHQESFKR
KFNHMPYEEIGDISHCVPQVSFFEVADYVAYQDSLARLRRTLGREDRLKLEKVIRGERFEGKKDFLKSIEPYFSDFRP

Nucleotide


Download         Length: 477 bp        

>NTDB_id=526655 I6J15_RS01450 WP_111712607.1 289006..289482(-) (comX/sigX) [Streptococcus lutetiensis strain FDAARGOS_1158]
GTGGATTTTGAACGCTATTTTCAAACGGTTAAACCAATTATTTTAAAATTACGCCGTTATTATTTTGTCAAACTCTGGGA
TTATGAGGATTGGATTCAAGAGGGACGTATTATTTTCTTTGAACTTGTAGAGGAACATCCTGATCTCTTAATTAATGAAG
GCAAACGTTATAGCTACTTTAAAACAAAATTTTCTAACCATGTTAAAGATATTATCCGCCATCAGGAATCCTTTAAACGA
AAATTTAATCATATGCCTTATGAAGAAATTGGTGATATTAGTCACTGTGTACCCCAGGTATCTTTCTTTGAAGTCGCAGA
TTACGTGGCTTATCAGGATAGCTTAGCACGTTTACGAAGAACATTGGGAAGAGAAGATAGACTGAAGTTGGAAAAAGTGA
TTCGTGGGGAACGTTTTGAAGGGAAGAAAGACTTCTTAAAAAGCATTGAACCGTATTTCTCAGATTTTAGACCATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.