Detailed information NTG0516233

Bioinformatically predicted

Overview

• Name: pilA/pilA1
• Type: Machinery gene
• Locus tag: I6I17_RS00535
• Genome accession: NZ_CP065999
• Coordinates: 91768..92202 (+)
• Length: 144 a.a.
• NCBI ID: WP_115324767.1
• Uniprot ID: -
• Organism: Kingella denitrificans strain FDAARGOS_1060
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 86768..97202

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6I17_RS00520 (I6I17_00520)	-	88593..89072 (-)	480	WP_003783306.1	hypothetical protein	-
I6I17_RS00525 (I6I17_00525)	-	89268..90137 (-)	870	WP_003783308.1	hypothetical protein	-
I6I17_RS00530 (I6I17_00530)	-	90370..91227 (-)	858	WP_003783309.1	hypothetical protein	-
I6I17_RS00535 (I6I17_00535)	pilA/pilA1	91768..92202 (+)	435	WP_115324767.1	pilin	Machinery gene
I6I17_RS00540 (I6I17_00540)	-	92367..92834 (-)	468	WP_003783311.1	type IV pilin protein	-
I6I17_RS00545 (I6I17_00545)	rpsQ	92963..93226 (-)	264	WP_003783313.1	30S ribosomal protein S17	-
I6I17_RS00550 (I6I17_00550)	rpmC	93226..93417 (-)	192	WP_003783315.1	50S ribosomal protein L29	-
I6I17_RS00555 (I6I17_00555)	rplP	93417..93833 (-)	417	WP_003783318.1	50S ribosomal protein L16	-
I6I17_RS00560 (I6I17_00560)	rpsC	93817..94518 (-)	702	WP_003783319.1	30S ribosomal protein S3	-
I6I17_RS00565 (I6I17_00565)	rplV	94528..94857 (-)	330	WP_003783321.1	50S ribosomal protein L22	-
I6I17_RS00570 (I6I17_00570)	rpsS	94866..95144 (-)	279	WP_002642293.1	30S ribosomal protein S19	-
I6I17_RS00575 (I6I17_00575)	rplB	95149..95982 (-)	834	WP_003783323.1	50S ribosomal protein L2	-
I6I17_RS00580 (I6I17_00580)	rplW	95985..96299 (-)	315	WP_172460025.1	50S ribosomal protein L23	-
I6I17_RS00585 (I6I17_00585)	rplD	96296..96916 (-)	621	WP_003783327.1	50S ribosomal protein L4	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 14717.75 Da
• Isoelectric Point: 9.0590

>NTDB_id=516233 I6I17_RS00535 WP_115324767.1 91768..92202(+) (pilA/pilA1) [Kingella denitrificans strain FDAARGOS_1060]
MKTMQKGFTLIELMIVIAIIGILAAIALPAYQDYTARAQATEGFKATSGLQTDIGVYAADKGNLTGVDSDSALTSQASAL
SGKYFSSGAATIGANGVITVSFNNGANSGQTMTLTPSLNTANGQITKWTCAGSIAAKRLPSSCR

Nucleotide

• Length: 435 bp

>NTDB_id=516233 I6I17_RS00535 WP_115324767.1 91768..92202(+) (pilA/pilA1) [Kingella denitrificans strain FDAARGOS_1060]
ATGAAAACAATGCAAAAAGGTTTCACCCTGATCGAGTTGATGATCGTTATCGCAATTATCGGTATTTTGGCTGCCATCGC
ATTGCCTGCATACCAAGACTACACTGCACGTGCGCAAGCTACTGAAGGCTTCAAAGCAACTTCAGGCCTGCAAACTGACA
TCGGTGTTTACGCTGCCGACAAAGGTAATTTGACAGGTGTTGATTCCGACTCAGCCCTGACTTCTCAAGCTTCTGCTTTG
AGCGGTAAATACTTCTCTAGCGGTGCTGCTACTATCGGCGCTAACGGTGTGATTACCGTATCATTCAACAACGGTGCGAA
CTCTGGTCAAACAATGACTCTGACTCCATCTTTGAACACTGCCAACGGTCAAATCACCAAATGGACTTGTGCGGGTTCTA
TCGCTGCCAAACGTCTGCCTTCTAGCTGCCGTTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (4-28)

• Pilin (bacterial filament) (Pilin) (36-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA/pilA1	Eikenella corrodens VA1	57.895	100	0.611
pilA2	Legionella pneumophila str. Paris	49.342	100	0.521
pilE	Neisseria elongata subsp. glycolytica ATCC 29315	37.566	100	0.493
pilA2	Legionella pneumophila strain ERS1305867	46.809	97.917	0.458
pilE	Neisseria gonorrhoeae strain FA1090	40.491	100	0.458
comP	Acinetobacter baylyi ADP1	43.836	100	0.444
pilA/pilAI	Pseudomonas stutzeri DSM 10701	42.568	100	0.438
pilE	Neisseria gonorrhoeae MS11	38.182	100	0.438
pilA	Ralstonia pseudosolanacearum GMI1000	37.126	100	0.431
pilA	Acinetobacter nosocomialis M2	40.278	100	0.403
pilA	Glaesserella parasuis strain SC1401	36.806	100	0.368
pilA/pilAII	Pseudomonas stutzeri DSM 10701	34.416	100	0.368
pilA	Acinetobacter baumannii strain A118	37.857	97.222	0.368