Detailed information NTG0049031

Bioinformatically predicted

Overview

• Name: comGC/cglC
• Type: Machinery gene
• Locus tag: SESEC_RS00680
• Genome accession: NC_017582
• Coordinates: 121509..121832 (+)
• Length: 107 a.a.
• NCBI ID: WP_014622142.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus ATCC 35246
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 116509..126832

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SESEC_RS00660 (SeseC_00117)	-	116774..118777 (+)	2004	WP_014622138.1	DUF1430 domain-containing protein	-
SESEC_RS00665 (SeseC_00118)	-	118779..119447 (+)	669	WP_014622139.1	ATP-binding cassette domain-containing protein	-
SESEC_RS00670 (SeseC_00119)	comGA/cglA	119603..120541 (+)	939	WP_038674626.1	competence type IV pilus ATPase ComGA	Machinery gene
SESEC_RS00675 (SeseC_00120)	comYB	120474..121508 (+)	1035	WP_228269618.1	competence type IV pilus assembly protein ComGB	Machinery gene
SESEC_RS00680 (SeseC_00121)	comGC/cglC	121509..121832 (+)	324	WP_014622142.1	competence type IV pilus major pilin ComGC	Machinery gene
SESEC_RS00685 (SeseC_00122)	comGD	121810..122235 (+)	426	WP_012678812.1	competence type IV pilus minor pilin ComGD	-
SESEC_RS00690 (SeseC_00123)	comGE	122240..122482 (+)	243	WP_012677236.1	competence type IV pilus minor pilin ComGE	-
SESEC_RS00695 (SeseC_00125)	comYF	122469..122903 (+)	435	WP_014622144.1	competence type IV pilus minor pilin ComGF	Machinery gene
SESEC_RS10785 (SeseC_00126)	comGG	122881..123060 (+)	180	WP_014622145.1	competence type IV pilus minor pilin ComGG	-
SESEC_RS00705 (SeseC_00127)	comYH	123305..124258 (+)	954	WP_014622146.1	class I SAM-dependent methyltransferase	Machinery gene
SESEC_RS00710 (SeseC_00128)	-	124318..125517 (+)	1200	WP_012678817.1	acetate kinase	-
SESEC_RS00715 (SeseC_00129)	-	125882..126493 (-)	612	WP_014622147.1	hypothetical protein	-

Sequence

Protein

• Length: 107 a.a.
• Molecular weight: 12093.13 Da
• Isoelectric Point: 9.3196

>NTDB_id=49031 SESEC_RS00680 WP_014622142.1 121509..121832(+) (comGC/cglC) [Streptococcus equi subsp. zooepidemicus ATCC 35246]
MKMRLSTLKGQAVQAFTLLEMLLVLLIISVLMLLFVPNLSKQKDKVTDTGNAAVVKLVENQAELYELSHGEKPSLKQLQE
DGSISDKQQKAYQDYYAKHKDEAKKLN

Nucleotide

• Length: 324 bp

>NTDB_id=49031 SESEC_RS00680 WP_014622142.1 121509..121832(+) (comGC/cglC) [Streptococcus equi subsp. zooepidemicus ATCC 35246]
ATGAAAATGAGATTATCAACCTTAAAAGGTCAAGCTGTTCAGGCTTTCACTTTGCTGGAAATGCTTCTGGTTTTGTTAAT
CATTAGTGTTCTGATGCTGTTATTTGTTCCAAATTTAAGTAAGCAAAAGGATAAGGTGACAGATACAGGCAACGCTGCAG
TGGTAAAGCTAGTTGAAAATCAGGCAGAGCTTTATGAATTATCACATGGGGAAAAGCCAAGCCTGAAGCAGCTGCAAGAG
GATGGAAGCATCAGTGACAAGCAACAAAAGGCTTATCAGGATTATTATGCAAAGCATAAAGATGAAGCTAAGAAGCTCAA
TTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (14-34)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC/cglC	Streptococcus mitis SK321	59.813	100	0.598
comGC/cglC	Streptococcus pneumoniae Rx1	57.944	100	0.579
comGC/cglC	Streptococcus pneumoniae D39	57.944	100	0.579
comGC/cglC	Streptococcus pneumoniae R6	57.944	100	0.579
comGC/cglC	Streptococcus pneumoniae TIGR4	57.944	100	0.579
comYC	Streptococcus gordonii str. Challis substr. CH1	60.396	94.393	0.57
comGC/cglC	Streptococcus mitis NCTC 12261	61.616	92.523	0.57
comYC	Streptococcus mutans UA140	58.763	90.654	0.533
comYC	Streptococcus mutans UA159	58.763	90.654	0.533
comGC	Lactococcus lactis subsp. cremoris KW2	56.842	88.785	0.505
comYC	Streptococcus suis isolate S10	60	74.766	0.449
comGC	Staphylococcus aureus MW2	50	72.897	0.364
comGC	Staphylococcus aureus N315	50	72.897	0.364