Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | SESEC_RS00705 | Genome accession | NC_017582 |
| Coordinates | 123305..124258 (+) | Length | 317 a.a. |
| NCBI ID | WP_014622146.1 | Uniprot ID | - |
| Organism | Streptococcus equi subsp. zooepidemicus ATCC 35246 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 118305..129258
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SESEC_RS00665 (SeseC_00118) | - | 118779..119447 (+) | 669 | WP_014622139.1 | ATP-binding cassette domain-containing protein | - |
| SESEC_RS00670 (SeseC_00119) | comGA/cglA | 119603..120541 (+) | 939 | WP_038674626.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SESEC_RS00675 (SeseC_00120) | comYB | 120474..121508 (+) | 1035 | WP_228269618.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SESEC_RS00680 (SeseC_00121) | comGC/cglC | 121509..121832 (+) | 324 | WP_014622142.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SESEC_RS00685 (SeseC_00122) | comGD | 121810..122235 (+) | 426 | WP_012678812.1 | competence type IV pilus minor pilin ComGD | - |
| SESEC_RS00690 (SeseC_00123) | comGE | 122240..122482 (+) | 243 | WP_012677236.1 | competence type IV pilus minor pilin ComGE | - |
| SESEC_RS00695 (SeseC_00125) | comYF | 122469..122903 (+) | 435 | WP_014622144.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SESEC_RS10785 (SeseC_00126) | comGG | 122881..123060 (+) | 180 | WP_014622145.1 | competence type IV pilus minor pilin ComGG | - |
| SESEC_RS00705 (SeseC_00127) | comYH | 123305..124258 (+) | 954 | WP_014622146.1 | class I SAM-dependent methyltransferase | Machinery gene |
| SESEC_RS00710 (SeseC_00128) | - | 124318..125517 (+) | 1200 | WP_012678817.1 | acetate kinase | - |
| SESEC_RS00715 (SeseC_00129) | - | 125882..126493 (-) | 612 | WP_014622147.1 | hypothetical protein | - |
| SESEC_RS00720 (SeseC_00132) | - | 127016..129058 (+) | 2043 | WP_014622149.1 | BglG family transcription antiterminator | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35657.62 Da Isoelectric Point: 4.8378
>NTDB_id=49033 SESEC_RS00705 WP_014622146.1 123305..124258(+) (comYH) [Streptococcus equi subsp. zooepidemicus ATCC 35246]
MNFEKIEQAYELILENSQLIENNLKTHIYDAIVEQNSFYLGAQGASPQVAKNIETLKALQLTKEEWRQAYQFVLIKAGKT
EPLQANHQFTPDAIGFIMLYILETLSSQESLDVLEIGSGTGNLAHTILNHSHQAIHYLGVELDDLLIDLSASIAEIMGSS
AQFIQEDAVRPQLLKESDMIISDLPVGFYPNDDIASRYQVASSDEHTYAHHLLMEQALKYLKKDGFAIFLAPVNLLSSPQ
SHLLKQWLKGYAQVAALITLPEAVFGNPANAKSIIVLCKQSNRFAETFVYPISDLKSVDNVRDFMENFKNWKRDNVI
MNFEKIEQAYELILENSQLIENNLKTHIYDAIVEQNSFYLGAQGASPQVAKNIETLKALQLTKEEWRQAYQFVLIKAGKT
EPLQANHQFTPDAIGFIMLYILETLSSQESLDVLEIGSGTGNLAHTILNHSHQAIHYLGVELDDLLIDLSASIAEIMGSS
AQFIQEDAVRPQLLKESDMIISDLPVGFYPNDDIASRYQVASSDEHTYAHHLLMEQALKYLKKDGFAIFLAPVNLLSSPQ
SHLLKQWLKGYAQVAALITLPEAVFGNPANAKSIIVLCKQSNRFAETFVYPISDLKSVDNVRDFMENFKNWKRDNVI
Nucleotide
Download Length: 954 bp
>NTDB_id=49033 SESEC_RS00705 WP_014622146.1 123305..124258(+) (comYH) [Streptococcus equi subsp. zooepidemicus ATCC 35246]
ATGAATTTTGAAAAGATTGAACAAGCCTATGAGCTTATATTAGAAAATAGCCAGCTGATTGAAAATAATTTAAAAACGCA
TATCTATGATGCTATTGTTGAGCAGAATTCTTTTTATCTGGGAGCCCAAGGAGCAAGCCCTCAGGTTGCTAAAAATATTG
AGACGTTGAAGGCCTTGCAGTTAACCAAGGAGGAGTGGCGCCAGGCTTATCAGTTTGTTTTGATCAAGGCTGGGAAAACA
GAGCCATTACAGGCCAACCACCAATTTACCCCAGACGCGATCGGCTTTATCATGCTTTATATTTTGGAGACCTTGAGCTC
ACAAGAGTCACTTGATGTGCTTGAGATTGGCAGTGGGACAGGCAATCTGGCTCACACCATTTTAAACCATTCACACCAAG
CGATTCATTATTTAGGGGTTGAGCTTGATGATTTATTAATTGATCTATCCGCTAGTATTGCTGAAATCATGGGGTCATCA
GCCCAGTTTATTCAAGAGGATGCTGTCAGACCTCAGCTGTTAAAGGAAAGTGATATGATCATTAGTGATTTGCCAGTTGG
CTTTTATCCTAACGATGATATTGCCAGCAGGTATCAGGTGGCTAGCTCAGATGAGCATACCTATGCCCATCATTTACTGA
TGGAGCAGGCCTTAAAGTACCTGAAAAAAGATGGCTTTGCTATTTTCTTAGCACCGGTAAATCTTTTGAGCAGCCCACAA
AGTCACCTCTTAAAACAATGGCTGAAGGGCTATGCTCAGGTTGCGGCCTTGATTACTTTGCCTGAGGCTGTGTTTGGAAA
TCCAGCTAATGCAAAATCGATTATTGTTCTTTGTAAGCAATCGAATCGCTTTGCAGAAACCTTTGTTTACCCCATTAGTG
ATTTGAAATCTGTTGATAATGTTCGTGATTTTATGGAAAACTTCAAAAATTGGAAACGGGATAATGTTATTTAA
ATGAATTTTGAAAAGATTGAACAAGCCTATGAGCTTATATTAGAAAATAGCCAGCTGATTGAAAATAATTTAAAAACGCA
TATCTATGATGCTATTGTTGAGCAGAATTCTTTTTATCTGGGAGCCCAAGGAGCAAGCCCTCAGGTTGCTAAAAATATTG
AGACGTTGAAGGCCTTGCAGTTAACCAAGGAGGAGTGGCGCCAGGCTTATCAGTTTGTTTTGATCAAGGCTGGGAAAACA
GAGCCATTACAGGCCAACCACCAATTTACCCCAGACGCGATCGGCTTTATCATGCTTTATATTTTGGAGACCTTGAGCTC
ACAAGAGTCACTTGATGTGCTTGAGATTGGCAGTGGGACAGGCAATCTGGCTCACACCATTTTAAACCATTCACACCAAG
CGATTCATTATTTAGGGGTTGAGCTTGATGATTTATTAATTGATCTATCCGCTAGTATTGCTGAAATCATGGGGTCATCA
GCCCAGTTTATTCAAGAGGATGCTGTCAGACCTCAGCTGTTAAAGGAAAGTGATATGATCATTAGTGATTTGCCAGTTGG
CTTTTATCCTAACGATGATATTGCCAGCAGGTATCAGGTGGCTAGCTCAGATGAGCATACCTATGCCCATCATTTACTGA
TGGAGCAGGCCTTAAAGTACCTGAAAAAAGATGGCTTTGCTATTTTCTTAGCACCGGTAAATCTTTTGAGCAGCCCACAA
AGTCACCTCTTAAAACAATGGCTGAAGGGCTATGCTCAGGTTGCGGCCTTGATTACTTTGCCTGAGGCTGTGTTTGGAAA
TCCAGCTAATGCAAAATCGATTATTGTTCTTTGTAAGCAATCGAATCGCTTTGCAGAAACCTTTGTTTACCCCATTAGTG
ATTTGAAATCTGTTGATAATGTTCGTGATTTTATGGAAAACTTCAAAAATTGGAAACGGGATAATGTTATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
62.342 |
99.685 |
0.621 |
| comYH | Streptococcus mutans UA140 |
62.342 |
99.685 |
0.621 |