Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | IC588_RS07990 | Genome accession | NZ_CP061349 |
| Coordinates | 1638094..1638393 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain MSSA01 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1633094..1643393
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IC588_RS07965 (IC588_07965) | gcvPA | 1634306..1635652 (-) | 1347 | WP_000019689.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| IC588_RS07970 (IC588_07970) | gcvT | 1635672..1636763 (-) | 1092 | WP_000093348.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| IC588_RS07975 (IC588_07975) | - | 1636922..1637446 (-) | 525 | WP_001015123.1 | shikimate kinase | - |
| IC588_RS07980 (IC588_07980) | - | 1637436..1637582 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| IC588_RS07985 (IC588_07985) | comGF | 1637679..1638176 (-) | 498 | WP_029642894.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| IC588_RS07990 (IC588_07990) | comGE | 1638094..1638393 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| IC588_RS07995 (IC588_07995) | comGD | 1638380..1638826 (-) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| IC588_RS08000 (IC588_08000) | comGC | 1638804..1639115 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| IC588_RS08005 (IC588_08005) | comGB | 1639129..1640199 (-) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| IC588_RS08010 (IC588_08010) | comGA | 1640171..1641145 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| IC588_RS08015 (IC588_08015) | - | 1641170..1642814 (-) | 1645 | Protein_1582 | IS1182 family transposase | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=482033 IC588_RS07990 WP_000844413.1 1638094..1638393(-) (comGE) [Staphylococcus aureus strain MSSA01]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=482033 IC588_RS07990 WP_000844413.1 1638094..1638393(-) (comGE) [Staphylococcus aureus strain MSSA01]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |