Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX   Type   Regulator
Locus tag   FOC73_RS06155 Genome accession   NZ_CP053998
Coordinates   1255979..1256476 (+) Length   165 a.a.
NCBI ID   WP_002885610.1    Uniprot ID   A0A2I1TJX9
Organism   Streptococcus salivarius strain FDAARGOS_771     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1250979..1261476
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC73_RS06155 (FOC73_06155) comX 1255979..1256476 (+) 498 WP_002885610.1 sigma factor Regulator
  FOC73_RS06160 (FOC73_06160) - 1256584..1257426 (-) 843 WP_037605435.1 mechanosensitive ion channel family protein -
  FOC73_RS06165 (FOC73_06165) tig 1257569..1258852 (+) 1284 WP_002885606.1 trigger factor -
  FOC73_RS06170 (FOC73_06170) rpoE 1259010..1259585 (+) 576 WP_002885605.1 DNA-directed RNA polymerase subunit delta -
  FOC73_RS06175 (FOC73_06175) - 1259838..1261442 (+) 1605 WP_002885608.1 CTP synthase -

Sequence

Protein


Download         Length: 165 a.a.        Molecular weight: 20008.84 Da        Isoelectric Point: 4.9953

>NTDB_id=449953 FOC73_RS06155 WP_002885610.1 1255979..1256476(+) (comX) [Streptococcus salivarius strain FDAARGOS_771]
MEQEVFVHAYEVVRPIVLKASRQYFIQLWDLADMEQEAMMTLYQLLEKFPELKSDDDKLRRYFKTKFRNRLNDEVRRQES
VKRQANRQCYIEISDIAFCLPNKELDAVDRLVYDEQLNAFRNQLSSEDATKLDRLLAGECFRGRKKMIRELKFWMVDFDP
YNEDD

Nucleotide


Download         Length: 498 bp        

>NTDB_id=449953 FOC73_RS06155 WP_002885610.1 1255979..1256476(+) (comX) [Streptococcus salivarius strain FDAARGOS_771]
ATGGAACAAGAAGTTTTTGTTCATGCATATGAAGTTGTAAGGCCGATTGTACTTAAGGCTAGTAGACAATATTTCATCCA
ACTTTGGGACCTTGCTGATATGGAGCAAGAGGCTATGATGACGCTTTATCAGCTTTTAGAAAAGTTTCCTGAATTAAAGT
CTGATGATGATAAGTTACGGCGTTATTTTAAAACTAAATTTAGGAATAGACTTAATGATGAGGTTAGAAGGCAGGAGTCT
GTAAAACGTCAAGCTAATCGACAATGTTATATTGAAATTTCAGATATTGCTTTTTGTCTTCCAAATAAAGAGTTAGATGC
TGTTGATAGGCTTGTTTATGATGAGCAGCTTAATGCTTTCCGTAATCAGTTGTCTTCGGAAGATGCTACTAAGTTAGACC
GTTTGCTAGCTGGGGAGTGTTTTAGAGGTCGAAAAAAGATGATTCGAGAGTTAAAATTTTGGATGGTTGATTTTGATCCT
TACAATGAAGATGATTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2I1TJX9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.