Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   FOC96_RS11805 Genome accession   NZ_CP053965
Coordinates   1593825..1594619 (+) Length   264 a.a.
NCBI ID   WP_003161566.1    Uniprot ID   P52928
Organism   Bacillus cereus strain FDAARGOS_802     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1588825..1599619
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC96_RS11790 (FOC96_11785) argR 1589664..1590113 (+) 450 WP_001032581.1 arginine repressor ArgR -
  FOC96_RS11795 (FOC96_11790) recN 1590381..1592120 (+) 1740 WP_000947754.1 DNA repair protein RecN Machinery gene
  FOC96_RS11800 (FOC96_11795) spoIVB 1592239..1593537 (+) 1299 WP_002003478.1 SpoIVB peptidase -
  FOC96_RS11805 (FOC96_11800) spo0A 1593825..1594619 (+) 795 WP_003161566.1 sporulation transcription factor Spo0A Regulator
  FOC96_RS11810 (FOC96_11805) - 1594804..1595952 (+) 1149 Protein_1607 hypothetical protein -
  FOC96_RS11815 (FOC96_11810) - 1596120..1596266 (-) 147 WP_001247671.1 YycC family protein -
  FOC96_RS11820 (FOC96_11815) - 1596317..1597045 (+) 729 WP_000172561.1 glycerophosphodiester phosphodiesterase -
  FOC96_RS11825 (FOC96_11820) - 1597094..1597327 (-) 234 WP_001190187.1 DUF2627 domain-containing protein -
  FOC96_RS11830 (FOC96_11825) - 1597464..1599536 (+) 2073 WP_000810995.1 sigma-54-dependent Fis family transcriptional regulator -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29440.17 Da        Isoelectric Point: 7.4718

>NTDB_id=449522 FOC96_RS11805 WP_003161566.1 1593825..1594619(+) (spo0A) [Bacillus cereus strain FDAARGOS_802]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=449522 FOC96_RS11805 WP_003161566.1 1593825..1594619(+) (spo0A) [Bacillus cereus strain FDAARGOS_802]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTCG
TATTGGATATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAAAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAGGCGAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAATTTAGACGCGAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTACATGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGACATCGAATTACT
TGGATCTATTACGAAAGTATTGTATCCAGACATCGCGAAGAAATATAATACAACAGCAAGCCGCGTTGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCTGAGTTTATTGCAATGGTTGCGGATAAGTTGAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P52928

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818