Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | E3S78_RS13600 | Genome accession | NZ_CP047796 |
| Coordinates | 2774353..2774664 (+) | Length | 103 a.a. |
| NCBI ID | WP_000472257.1 | Uniprot ID | A0A115HMG3 |
| Organism | Staphylococcus aureus strain UP_462 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2769353..2779664
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3S78_RS13570 (E3S78_13570) | - | 2770136..2770339 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| E3S78_RS13575 (E3S78_13575) | - | 2770336..2771322 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| E3S78_RS13580 (E3S78_13580) | - | 2771322..2771651 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| E3S78_RS13585 (E3S78_13585) | - | 2771648..2772271 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| E3S78_RS13590 (E3S78_13590) | comGA | 2772323..2773297 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| E3S78_RS13595 (E3S78_13595) | comGB | 2773269..2774339 (+) | 1071 | WP_160176226.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| E3S78_RS13600 (E3S78_13600) | comGC | 2774353..2774664 (+) | 312 | WP_000472257.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| E3S78_RS13605 (E3S78_13605) | comGD | 2774642..2775088 (+) | 447 | WP_001791207.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| E3S78_RS13610 (E3S78_13610) | comGE | 2775075..2775374 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| E3S78_RS13615 (E3S78_13615) | comGF | 2775292..2775789 (+) | 498 | WP_001794055.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| E3S78_RS13620 (E3S78_13620) | - | 2775886..2776032 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| E3S78_RS13625 (E3S78_13625) | - | 2776022..2776546 (+) | 525 | WP_001015125.1 | shikimate kinase | - |
| E3S78_RS13630 (E3S78_13630) | gcvT | 2776705..2777796 (+) | 1092 | WP_000093347.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| E3S78_RS13635 (E3S78_13635) | gcvPA | 2777816..2779162 (+) | 1347 | WP_063636320.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 11373.39 Da Isoelectric Point: 7.8600
>NTDB_id=416566 E3S78_RS13600 WP_000472257.1 2774353..2774664(+) (comGC) [Staphylococcus aureus strain UP_462]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEEQKTCKSGETITISNGEAVAN
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEEQKTCKSGETITISNGEAVAN
Nucleotide
Download Length: 312 bp
>NTDB_id=416566 E3S78_RS13600 WP_000472257.1 2774353..2774664(+) (comGC) [Staphylococcus aureus strain UP_462]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGAGCAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGAGCAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus N315 |
99.029 |
100 |
0.99 |
| comGC | Staphylococcus aureus MW2 |
99.029 |
100 |
0.99 |
| comGC/cglC | Streptococcus mitis SK321 |
48.039 |
99.029 |
0.476 |
| comGC/cglC | Streptococcus pneumoniae R6 |
47.059 |
99.029 |
0.466 |
| comGC/cglC | Streptococcus pneumoniae D39 |
47.059 |
99.029 |
0.466 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
47.059 |
99.029 |
0.466 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
47.059 |
99.029 |
0.466 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
52.326 |
83.495 |
0.437 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
42.857 |
95.146 |
0.408 |
| comYC | Streptococcus suis isolate S10 |
50 |
75.728 |
0.379 |
| comYC | Streptococcus mutans UA140 |
50 |
73.786 |
0.369 |
| comYC | Streptococcus mutans UA159 |
50 |
73.786 |
0.369 |
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
41.758 |
88.35 |
0.369 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
46.341 |
79.612 |
0.369 |