Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | E3S78_RS13595 | Genome accession | NZ_CP047796 |
| Coordinates | 2773269..2774339 (+) | Length | 356 a.a. |
| NCBI ID | WP_160176226.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain UP_462 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2768269..2779339
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3S78_RS13565 (E3S78_13565) | - | 2768692..2770155 (+) | 1464 | WP_001017873.1 | rhomboid family protein | - |
| E3S78_RS13570 (E3S78_13570) | - | 2770136..2770339 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| E3S78_RS13575 (E3S78_13575) | - | 2770336..2771322 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| E3S78_RS13580 (E3S78_13580) | - | 2771322..2771651 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| E3S78_RS13585 (E3S78_13585) | - | 2771648..2772271 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| E3S78_RS13590 (E3S78_13590) | comGA | 2772323..2773297 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| E3S78_RS13595 (E3S78_13595) | comGB | 2773269..2774339 (+) | 1071 | WP_160176226.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| E3S78_RS13600 (E3S78_13600) | comGC | 2774353..2774664 (+) | 312 | WP_000472257.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| E3S78_RS13605 (E3S78_13605) | comGD | 2774642..2775088 (+) | 447 | WP_001791207.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| E3S78_RS13610 (E3S78_13610) | comGE | 2775075..2775374 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| E3S78_RS13615 (E3S78_13615) | comGF | 2775292..2775789 (+) | 498 | WP_001794055.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| E3S78_RS13620 (E3S78_13620) | - | 2775886..2776032 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| E3S78_RS13625 (E3S78_13625) | - | 2776022..2776546 (+) | 525 | WP_001015125.1 | shikimate kinase | - |
| E3S78_RS13630 (E3S78_13630) | gcvT | 2776705..2777796 (+) | 1092 | WP_000093347.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| E3S78_RS13635 (E3S78_13635) | gcvPA | 2777816..2779162 (+) | 1347 | WP_063636320.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 41441.91 Da Isoelectric Point: 10.1030
>NTDB_id=416565 E3S78_RS13595 WP_160176226.1 2773269..2774339(+) (comGB) [Staphylococcus aureus strain UP_462]
MKLQWINIFKLHSKKRQLSKAQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMTYKNKQLGTTILSEISNGAPCNKILSLIG
YSDTIVLQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLLKTLQYPLILVSIFIAMIIILNLTVIPQFQQLYTSMNIQLS
SFQKTLSFFITSLPTIIVVMLIIVSMLAIIMKLIYNNLNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQ
SIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLEVELKLYSQILVKQIEDKAIK
QTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSIK
MKLQWINIFKLHSKKRQLSKAQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMTYKNKQLGTTILSEISNGAPCNKILSLIG
YSDTIVLQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLLKTLQYPLILVSIFIAMIIILNLTVIPQFQQLYTSMNIQLS
SFQKTLSFFITSLPTIIVVMLIIVSMLAIIMKLIYNNLNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQ
SIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLEVELKLYSQILVKQIEDKAIK
QTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSIK
Nucleotide
Download Length: 1071 bp
>NTDB_id=416565 E3S78_RS13595 WP_160176226.1 2773269..2774339(+) (comGB) [Staphylococcus aureus strain UP_462]
GTGAAACTACAATGGATAAATATATTTAAACTACATTCTAAGAAGCGACAATTAAGTAAGGCCCAACAAATCGATTTACT
TTCAAATTTATGTAATTTGTTGAAATATGGTTTCACTCTGTATCAAAGTTTTCAATTTTTAAATCTTCAAATGACATATA
AAAATAAGCAATTAGGTACCACCATTCTAAGTGAAATTTCAAATGGTGCACCATGCAATAAGATATTATCACTGATAGGT
TATAGCGATACTATCGTCCTGCAAGTATATTTGGCAGAAAGATTTGGCAATATCATAGACGTTCTAGAAGAAACCGTAAA
TTATATGAAAGTGAATAGAAAGTCAGAACAACGATTGTTAAAGACACTGCAATACCCCTTAATACTAGTTTCTATTTTTA
TTGCTATGATTATTATATTAAACCTCACAGTAATTCCACAGTTTCAACAATTATATACTTCTATGAATATTCAACTATCT
TCTTTTCAAAAAACATTGTCTTTTTTCATTACCAGCTTACCTACTATAATTGTAGTAATGCTCATAATAGTATCTATGTT
GGCTATTATTATGAAATTAATTTATAACAATTTAAATATGCTCAATAAGATAAACTTTGTGATGAAACTACCGCTAATAT
CAGGCTATTTCCAATTATTTAAAACTTATTTTGTAACTAATGAATTAGTGTTGTTTTATAAAAATGGTATTACACTTCAA
TCAATAGTAGACGTTTATATTAACCATAGTAGTGATCCATTTAGACAGTTTCTAGGTAAATACTTATTAACTTATTCAGA
AATGGGATATGGTTTGCCTCAAATTTTAGAAAAACTAAAATGCTTTAAGCCTCAATTAATTAAGTTTGTGCTACAAGGTG
AAAAGAGAGGGAAGCTAGAAGTAGAACTAAAGTTATATTCGCAAATATTAGTAAAACAAATAGAAGATAAAGCGATAAAA
CAGACTCAGTTTTTACAGCCTATTTTATTTTTGATTTTAGGTTTATTTATTGTCGCAATTTATTTAGTAATTATGTTACC
GATGTTTCAAATGATGCAAAGTATAAAATAA
GTGAAACTACAATGGATAAATATATTTAAACTACATTCTAAGAAGCGACAATTAAGTAAGGCCCAACAAATCGATTTACT
TTCAAATTTATGTAATTTGTTGAAATATGGTTTCACTCTGTATCAAAGTTTTCAATTTTTAAATCTTCAAATGACATATA
AAAATAAGCAATTAGGTACCACCATTCTAAGTGAAATTTCAAATGGTGCACCATGCAATAAGATATTATCACTGATAGGT
TATAGCGATACTATCGTCCTGCAAGTATATTTGGCAGAAAGATTTGGCAATATCATAGACGTTCTAGAAGAAACCGTAAA
TTATATGAAAGTGAATAGAAAGTCAGAACAACGATTGTTAAAGACACTGCAATACCCCTTAATACTAGTTTCTATTTTTA
TTGCTATGATTATTATATTAAACCTCACAGTAATTCCACAGTTTCAACAATTATATACTTCTATGAATATTCAACTATCT
TCTTTTCAAAAAACATTGTCTTTTTTCATTACCAGCTTACCTACTATAATTGTAGTAATGCTCATAATAGTATCTATGTT
GGCTATTATTATGAAATTAATTTATAACAATTTAAATATGCTCAATAAGATAAACTTTGTGATGAAACTACCGCTAATAT
CAGGCTATTTCCAATTATTTAAAACTTATTTTGTAACTAATGAATTAGTGTTGTTTTATAAAAATGGTATTACACTTCAA
TCAATAGTAGACGTTTATATTAACCATAGTAGTGATCCATTTAGACAGTTTCTAGGTAAATACTTATTAACTTATTCAGA
AATGGGATATGGTTTGCCTCAAATTTTAGAAAAACTAAAATGCTTTAAGCCTCAATTAATTAAGTTTGTGCTACAAGGTG
AAAAGAGAGGGAAGCTAGAAGTAGAACTAAAGTTATATTCGCAAATATTAGTAAAACAAATAGAAGATAAAGCGATAAAA
CAGACTCAGTTTTTACAGCCTATTTTATTTTTGATTTTAGGTTTATTTATTGTCGCAATTTATTTAGTAATTATGTTACC
GATGTTTCAAATGATGCAAAGTATAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Staphylococcus aureus MW2 |
99.157 |
100 |
0.992 |
| comGB | Staphylococcus aureus N315 |
99.157 |
100 |
0.992 |