Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | GRX76_RS01810 | Genome accession | NZ_CP047569 |
| Coordinates | 464531..465679 (+) | Length | 382 a.a. |
| NCBI ID | WP_160151732.1 | Uniprot ID | - |
| Organism | Microbulbifer sp. ALW1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 459531..470679
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GRX76_RS01795 | - | 460303..462399 (+) | 2097 | WP_160151729.1 | alpha/beta fold hydrolase | - |
| GRX76_RS01800 | - | 462464..463159 (-) | 696 | WP_160151730.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| GRX76_RS01805 | pilT | 463259..464293 (+) | 1035 | WP_160151731.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| GRX76_RS01810 | pilU | 464531..465679 (+) | 1149 | WP_160151732.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| GRX76_RS01815 | - | 465752..466507 (+) | 756 | WP_160151733.1 | SDR family oxidoreductase | - |
| GRX76_RS01820 | - | 466536..468212 (+) | 1677 | WP_160151734.1 | amidohydrolase | - |
| GRX76_RS01825 | - | 468221..468988 (-) | 768 | WP_160151735.1 | LytTR family DNA-binding domain-containing protein | - |
| GRX76_RS01830 | - | 468981..470264 (-) | 1284 | WP_160151736.1 | sensor histidine kinase | - |
Sequence
Protein
Download Length: 382 a.a. Molecular weight: 42517.79 Da Isoelectric Point: 6.1920
>NTDB_id=414210 GRX76_RS01810 WP_160151732.1 464531..465679(+) (pilU) [Microbulbifer sp. ALW1]
MEIERLLQLVTEKGASDLFITAGVPPSIKLHGKIVPVSTSALTPEKAREMVVSIMNDRQKKEFAESKELNFAISVRNVGR
FRVSAFFQRNLVGMVLRRIETKIPTIDGLGLPEQLKELAMTKRGLIIFVGATGTGKSTSLASMIGHRNEHSKGHIISIED
PIEFIHQHRGCIVTQREVGLDTESFETALKNTLRQAPDVILIGEVRSRETMDHAIAFAETGHLCLCTLHANNANQALDRI
IHFFPADRHQQLWMDLSLNLQAMVAQQLVPTPDGDGRRACLEIMINTPLMSDLIRKGEVHKMKELMKRSVEQGMQTFDQA
LYELYDRGEITYEDALAHADSANDLRLMIKLKSESDAEYLNSAADELSLASDTDSGGAPSIY
MEIERLLQLVTEKGASDLFITAGVPPSIKLHGKIVPVSTSALTPEKAREMVVSIMNDRQKKEFAESKELNFAISVRNVGR
FRVSAFFQRNLVGMVLRRIETKIPTIDGLGLPEQLKELAMTKRGLIIFVGATGTGKSTSLASMIGHRNEHSKGHIISIED
PIEFIHQHRGCIVTQREVGLDTESFETALKNTLRQAPDVILIGEVRSRETMDHAIAFAETGHLCLCTLHANNANQALDRI
IHFFPADRHQQLWMDLSLNLQAMVAQQLVPTPDGDGRRACLEIMINTPLMSDLIRKGEVHKMKELMKRSVEQGMQTFDQA
LYELYDRGEITYEDALAHADSANDLRLMIKLKSESDAEYLNSAADELSLASDTDSGGAPSIY
Nucleotide
Download Length: 1149 bp
>NTDB_id=414210 GRX76_RS01810 WP_160151732.1 464531..465679(+) (pilU) [Microbulbifer sp. ALW1]
ATGGAAATCGAACGACTCCTGCAACTGGTGACCGAAAAAGGCGCCTCCGACCTGTTCATCACCGCCGGTGTACCGCCGTC
CATCAAACTGCACGGCAAAATTGTCCCCGTCAGCACCTCCGCCCTGACCCCGGAAAAAGCCCGGGAAATGGTCGTCAGCA
TCATGAACGACCGCCAGAAAAAAGAATTCGCCGAAAGCAAAGAACTCAACTTCGCCATCTCCGTGCGCAACGTCGGCCGC
TTCCGGGTATCCGCCTTCTTCCAGCGCAACCTCGTCGGCATGGTACTGCGTCGGATTGAAACCAAAATCCCCACCATCGA
CGGACTGGGACTGCCAGAACAGCTCAAAGAACTGGCCATGACCAAACGCGGCCTGATCATCTTCGTGGGCGCCACCGGTA
CCGGTAAATCCACCTCGCTCGCCTCCATGATCGGCCACCGCAATGAGCACTCCAAGGGCCACATCATCTCCATCGAAGAC
CCCATCGAATTCATCCACCAGCACCGCGGCTGCATCGTCACCCAGCGCGAAGTGGGCCTGGATACCGAATCCTTCGAAAC
CGCCCTGAAAAATACTCTGCGACAGGCCCCCGACGTCATCCTCATTGGTGAGGTCCGCTCTCGCGAAACCATGGACCACG
CCATCGCCTTCGCCGAAACCGGCCACCTGTGCCTGTGTACCCTGCACGCCAACAACGCGAACCAGGCGCTGGACCGGATC
ATCCACTTCTTCCCCGCTGACCGTCACCAGCAACTGTGGATGGACCTGTCGCTTAACCTGCAGGCCATGGTCGCCCAGCA
GCTGGTACCGACCCCGGACGGCGATGGCCGCCGCGCCTGTCTCGAGATCATGATCAACACCCCGCTGATGTCAGACCTGA
TCCGCAAGGGCGAAGTACACAAAATGAAGGAGCTGATGAAGCGCTCCGTCGAGCAGGGTATGCAGACCTTCGACCAGGCC
CTGTACGAACTCTACGACCGCGGCGAAATCACCTACGAAGACGCCCTCGCCCACGCCGACTCCGCCAACGACCTGCGCCT
GATGATCAAGCTCAAGTCCGAGTCCGACGCCGAGTACCTCAACAGCGCGGCCGACGAACTGAGCCTCGCCAGCGACACCG
ACTCCGGCGGTGCACCAAGCATTTATTAA
ATGGAAATCGAACGACTCCTGCAACTGGTGACCGAAAAAGGCGCCTCCGACCTGTTCATCACCGCCGGTGTACCGCCGTC
CATCAAACTGCACGGCAAAATTGTCCCCGTCAGCACCTCCGCCCTGACCCCGGAAAAAGCCCGGGAAATGGTCGTCAGCA
TCATGAACGACCGCCAGAAAAAAGAATTCGCCGAAAGCAAAGAACTCAACTTCGCCATCTCCGTGCGCAACGTCGGCCGC
TTCCGGGTATCCGCCTTCTTCCAGCGCAACCTCGTCGGCATGGTACTGCGTCGGATTGAAACCAAAATCCCCACCATCGA
CGGACTGGGACTGCCAGAACAGCTCAAAGAACTGGCCATGACCAAACGCGGCCTGATCATCTTCGTGGGCGCCACCGGTA
CCGGTAAATCCACCTCGCTCGCCTCCATGATCGGCCACCGCAATGAGCACTCCAAGGGCCACATCATCTCCATCGAAGAC
CCCATCGAATTCATCCACCAGCACCGCGGCTGCATCGTCACCCAGCGCGAAGTGGGCCTGGATACCGAATCCTTCGAAAC
CGCCCTGAAAAATACTCTGCGACAGGCCCCCGACGTCATCCTCATTGGTGAGGTCCGCTCTCGCGAAACCATGGACCACG
CCATCGCCTTCGCCGAAACCGGCCACCTGTGCCTGTGTACCCTGCACGCCAACAACGCGAACCAGGCGCTGGACCGGATC
ATCCACTTCTTCCCCGCTGACCGTCACCAGCAACTGTGGATGGACCTGTCGCTTAACCTGCAGGCCATGGTCGCCCAGCA
GCTGGTACCGACCCCGGACGGCGATGGCCGCCGCGCCTGTCTCGAGATCATGATCAACACCCCGCTGATGTCAGACCTGA
TCCGCAAGGGCGAAGTACACAAAATGAAGGAGCTGATGAAGCGCTCCGTCGAGCAGGGTATGCAGACCTTCGACCAGGCC
CTGTACGAACTCTACGACCGCGGCGAAATCACCTACGAAGACGCCCTCGCCCACGCCGACTCCGCCAACGACCTGCGCCT
GATGATCAAGCTCAAGTCCGAGTCCGACGCCGAGTACCTCAACAGCGCGGCCGACGAACTGAGCCTCGCCAGCGACACCG
ACTCCGGCGGTGCACCAAGCATTTATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
74.536 |
98.691 |
0.736 |
| pilU | Acinetobacter baylyi ADP1 |
67.507 |
93.455 |
0.631 |
| pilU | Vibrio cholerae strain A1552 |
56.18 |
93.194 |
0.524 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
44.543 |
88.743 |
0.395 |
| pilT | Legionella pneumophila strain ERS1305867 |
42.687 |
87.696 |
0.374 |
| pilT | Legionella pneumophila strain Lp02 |
42.687 |
87.696 |
0.374 |
| pilT | Acinetobacter nosocomialis M2 |
41.791 |
87.696 |
0.366 |
| pilT | Acinetobacter baumannii D1279779 |
41.791 |
87.696 |
0.366 |
| pilT | Acinetobacter baumannii strain A118 |
41.791 |
87.696 |
0.366 |
| pilT | Vibrio cholerae strain A1552 |
41.916 |
87.435 |
0.366 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
41.916 |
87.435 |
0.366 |
| pilT | Pseudomonas aeruginosa PAK |
41.493 |
87.696 |
0.364 |