Detailed information NTG0411376

Bioinformatically predicted

Overview

• Name: comX
• Type: Regulator
• Locus tag: GQY29_RS02115
• Genome accession: NZ_CP047191
• Coordinates: 405036..405533 (-)
• Length: 165 a.a.
• NCBI ID: WP_002949220.1
• Uniprot ID: A0A0M4HKA9
• Organism: Streptococcus thermophilus strain EU01
• Function: activation of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 400036..410533

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GQY29_RS02095 (GQY29_02095)	-	400082..401686 (-)	1605	WP_002949230.1	CTP synthase	-
GQY29_RS02100 (GQY29_02100)	rpoE	401937..402512 (-)	576	WP_002949228.1	DNA-directed RNA polymerase subunit delta	-
GQY29_RS02105 (GQY29_02105)	tig	402670..403953 (-)	1284	WP_011680653.1	trigger factor	-
GQY29_RS02110 (GQY29_02110)	-	404094..404936 (+)	843	WP_024704159.1	mechanosensitive ion channel family protein	-
GQY29_RS02115 (GQY29_02115)	comX	405036..405533 (-)	498	WP_002949220.1	sigma factor	Regulator
GQY29_RS02120 (GQY29_02120)	-	405840..405929 (-)	90	Protein_403	IS200/IS605 family transposase	-
GQY29_RS02125 (GQY29_02125)	-	406287..406751 (+)	465	Protein_404	transposase family protein	-
GQY29_RS02130 (GQY29_02130)	-	407011..408201 (-)	1191	WP_084825614.1	cyclopropane-fatty-acyl-phospholipid synthase family protein	-
GQY29_RS02135 (GQY29_02135)	-	408304..408648 (-)	345	WP_023909336.1	aminoacylase	-
GQY29_RS02140 (GQY29_02140)	-	408844..409160 (+)	317	Protein_407	transposase	-
GQY29_RS02145 (GQY29_02145)	-	409245..409466 (-)	222	WP_002948904.1	DUF4649 family protein	-

Sequence

Protein

• Length: 165 a.a.
• Molecular weight: 20160.12 Da
• Isoelectric Point: 5.2073

>NTDB_id=411376 GQY29_RS02115 WP_002949220.1 405036..405533(-) (comX) [Streptococcus thermophilus strain EU01]
MEQEVFVKAYEKVRPIVLKAFRQYFIQLWDQADMEQEAMMTLYQLLKKFPDLEKDDDKLRRYFKTKFRNRLNDEVRRQES
VKRQANRQCYVEISDIAFCIPNKELDMVDRLAYDEQLNAFREQLSSEDSLKLDRLLGGECFRGRKKMIRELRFWMVDFDP
CNEED

Nucleotide

• Length: 498 bp

>NTDB_id=411376 GQY29_RS02115 WP_002949220.1 405036..405533(-) (comX) [Streptococcus thermophilus strain EU01]
ATGGAACAAGAAGTTTTTGTTAAGGCATATGAAAAGGTAAGGCCAATTGTACTTAAGGCGTTTAGGCAATACTTTATTCA
GCTTTGGGATCAAGCTGACATGGAGCAAGAGGCGATGATGACTTTGTATCAGCTTTTAAAAAAGTTTCCTGATTTAGAGA
AAGATGATGATAAGTTACGTCGTTACTTTAAAACTAAGTTTAGGAATCGACTTAATGATGAAGTGAGGCGGCAGGAGTCA
GTAAAACGTCAAGCTAATAGACAGTGTTATGTTGAAATTTCAGATATTGCCTTTTGTATTCCCAATAAGGAGCTAGATAT
GGTTGATAGACTTGCTTATGATGAACAGCTTAATGCTTTTCGTGAGCAGTTATCATCGGAAGATTCTCTTAAGTTGGATC
GATTGTTGGGTGGTGAATGCTTTAGGGGAAGGAAAAAGATGATACGAGAGTTAAGATTTTGGATGGTTGACTTTGATCCA
TGTAATGAAGAAGACTGA

Domains

Predicted by InterProScan.

• Sigma-70 region 2 (Sigma70_r2) (10-79)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX	Streptococcus thermophilus LMD-9	100	100	1
comX	Streptococcus thermophilus LMG 18311	100	100	1
comX/sigX	Streptococcus salivarius strain HSISS4	89.091	100	0.891
comX	Streptococcus salivarius SK126	88.485	100	0.885
comX	Streptococcus sobrinus strain NIDR 6715-7	41.975	98.182	0.412
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	42.581	93.939	0.4
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	42.581	93.939	0.4
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	41.667	94.545	0.394
comX/sigX	Streptococcus mutans UA159	41.026	94.545	0.388
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	42.667	90.909	0.388
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	42.667	90.909	0.388
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	42.667	90.909	0.388
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	42.667	90.909	0.388
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	42	90.909	0.382
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	42	90.909	0.382
comX/sigX	Streptococcus suis D9	40.523	92.727	0.376
comX/sigX	Streptococcus suis isolate S10	40.523	92.727	0.376
comX/sigX	Streptococcus suis P1/7	40.523	92.727	0.376