Detailed information NTG0409440

Bioinformatically predicted

Overview

• Name: comX/sigX
• Type: Regulator
• Locus tag: GPZ88_RS06200
• Genome accession: NZ_CP046919
• Coordinates: 1200635..1201111 (+)
• Length: 158 a.a.
• NCBI ID: WP_039696070.1
• Uniprot ID: A0A091BY39
• Organism: Streptococcus ruminicola strain CNU_G2
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1195635..1206111

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPZ88_RS06200 (GPZ88_06180)	comX/sigX	1200635..1201111 (+)	477	WP_039696070.1	sigma-70 family RNA polymerase sigma factor	Regulator
GPZ88_RS06205 (GPZ88_06185)	-	1201144..1202502 (-)	1359	WP_166043726.1	aspartate kinase	-
GPZ88_RS06210 (GPZ88_06190)	-	1202599..1203246 (+)	648	WP_074603757.1	HAD family hydrolase	-
GPZ88_RS06215 (GPZ88_06195)	-	1203437..1204225 (+)	789	WP_039695989.1	enoyl-CoA hydratase	-
GPZ88_RS06220 (GPZ88_06200)	-	1204341..1204775 (+)	435	WP_039695988.1	MarR family winged helix-turn-helix transcriptional regulator	-
GPZ88_RS06225 (GPZ88_06205)	-	1204778..1205752 (+)	975	WP_039695987.1	beta-ketoacyl-ACP synthase III	-
GPZ88_RS06230 (GPZ88_06210)	-	1205813..1206037 (+)	225	WP_006531079.1	acyl carrier protein	-

Sequence

Protein

• Length: 158 a.a.
• Molecular weight: 19427.34 Da
• Isoelectric Point: 9.6123

>NTDB_id=409440 GPZ88_RS06200 WP_039696070.1 1200635..1201111(+) (comX/sigX) [Streptococcus ruminicola strain CNU_G2]
MDFERYFQTVKPIILKLRRHYFVKLWDYEDWIQEGRIVFFQLLEEHPDLLINEGKRYSYFKTKFSNHVKDIIRHQESFKR
KFNRMPYEEIGDISHCVPQVSFFEVADYVAYQDSLARLRRTLGREDRLKLEKVIRGERFEGKKAFLKSIEPYFSDFRP

Nucleotide

• Length: 477 bp

>NTDB_id=409440 GPZ88_RS06200 WP_039696070.1 1200635..1201111(+) (comX/sigX) [Streptococcus ruminicola strain CNU_G2]
GTGGATTTTGAACGTTATTTTCAAACCGTTAAACCAATTATTTTAAAATTACGCCGTCATTATTTTGTCAAACTTTGGGA
TTATGAAGATTGGATTCAAGAAGGTCGAATTGTTTTCTTTCAACTCTTAGAGGAACATCCAGACCTCTTAATTAATGAAG
GCAAACGCTATAGCTACTTTAAAACAAAATTTTCTAACCATGTTAAAGATATTATCCGCCATCAGGAATCCTTTAAGAGG
AAATTTAATCGTATGCCTTATGAAGAAATTGGTGATATTAGTCACTGTGTGCCCCAGGTATCTTTCTTTGAAGTCGCAGA
TTACGTGGCTTATCAGGATAGCTTAGCACGTTTACGAAGAACATTGGGAAGAGAAGACCGACTAAAGTTGGAAAAAGTGA
TTCGTGGGGAACGTTTTGAAGGGAAGAAAGCCTTTTTAAAAAGCATTGAACCGTATTTCTCAGATTTTAGACCATAA

Domains

No domain identified.

3D structure

• AlphaFold DB: A0A091BY39

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	95.57	100	0.956
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	50.667	94.937	0.481
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	50.667	94.937	0.481
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	50.667	94.937	0.481
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	50.667	94.937	0.481
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	50.667	94.937	0.481
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	50.667	94.937	0.481
comX/sigX	Streptococcus mutans UA159	46.154	98.734	0.456
comX	Streptococcus sobrinus strain NIDR 6715-7	45.455	97.468	0.443
comX	Streptococcus thermophilus LMD-9	41.026	98.734	0.405
comX	Streptococcus thermophilus LMG 18311	41.026	98.734	0.405
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	39.241	100	0.392
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	39.241	100	0.392
comX/sigX	Streptococcus salivarius strain HSISS4	39.744	98.734	0.392
comX	Streptococcus salivarius SK126	39.744	98.734	0.392
comX/sigX	Streptococcus suis D9	38.854	99.367	0.386
comX/sigX	Streptococcus suis isolate S10	38.854	99.367	0.386
comX/sigX	Streptococcus suis P1/7	38.854	99.367	0.386