Detailed information NTG0409436

Bioinformatically predicted

Overview

• Name: comX/sigX
• Type: Regulator
• Locus tag: GPZ88_RS05920
• Genome accession: NZ_CP046919
• Coordinates: 1143263..1143739 (+)
• Length: 158 a.a.
• NCBI ID: WP_166043701.1
• Uniprot ID: A0A6G8I0F2
• Organism: Streptococcus ruminicola strain CNU_G2
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1138263..1148739

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPZ88_RS05920 (GPZ88_05900)	comX/sigX	1143263..1143739 (+)	477	WP_166043701.1	sigma-70 family RNA polymerase sigma factor	Regulator
GPZ88_RS05925 (GPZ88_05905)	-	1143935..1144201 (+)	267	WP_039696002.1	ACT domain-containing protein	-
GPZ88_RS05930 (GPZ88_05910)	-	1144213..1145550 (+)	1338	WP_006531013.1	PFL family protein	-
GPZ88_RS05935 (GPZ88_05915)	-	1145780..1146484 (+)	705	WP_158913158.1	histidine phosphatase family protein	-
GPZ88_RS05940 (GPZ88_05920)	-	1146468..1147244 (+)	777	WP_158913160.1	M15 family metallopeptidase	-
GPZ88_RS05945 (GPZ88_05925)	-	1147241..1147831 (+)	591	WP_158913162.1	glycoside hydrolase family 73 protein	-

Sequence

Protein

• Length: 158 a.a.
• Molecular weight: 19418.33 Da
• Isoelectric Point: 9.6122

>NTDB_id=409436 GPZ88_RS05920 WP_166043701.1 1143263..1143739(+) (comX/sigX) [Streptococcus ruminicola strain CNU_G2]
MDFERYFQTVKPIILKLRRHYFVKLWDYEDWIQEGRIVFFQLLEEQPDLLINEGKRYSYFKTKFSNHVKDIIRHQESFKR
KFNRMPYEEIGDISHCVPQVSFFEVADYVAYQDSLARLRRTLGREDRLKLEKVIRGERFEGKKAFLKSIEPYFSDFRP

Nucleotide

• Length: 477 bp

>NTDB_id=409436 GPZ88_RS05920 WP_166043701.1 1143263..1143739(+) (comX/sigX) [Streptococcus ruminicola strain CNU_G2]
GTGGATTTTGAACGCTATTTTCAAACGGTTAAACCAATTATTTTAAAATTACGCCGTCATTATTTTGTCAAACTTTGGGA
TTATGAAGATTGGATTCAAGAAGGTCGAATTGTTTTCTTTCAACTCTTAGAGGAACAGCCAGACCTCTTAATTAATGAAG
GCAAACGCTATAGCTACTTTAAAACAAAATTTTCTAACCATGTTAAAGATATTATCCGCCATCAGGAATCCTTTAAGAGG
AAATTTAATCGTATGCCTTATGAAGAAATTGGTGATATTAGTCACTGTGTGCCCCAGGTATCTTTCTTTGAAGTCGCAGA
TTACGTGGCTTATCAGGATAGCTTAGCACGTTTACGAAGAACATTGGGAAGAGAAGACCGACTAAAGTTGGAAAAAGTGA
TTCGTGGGGAACGTTTTGAAGGGAAGAAAGCCTTTTTAAAAAGCATTGAACCGTATTTCTCAGATTTTAGACCATAA

Domains

No domain identified.

3D structure

• AlphaFold DB: A0A6G8I0F2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	94.937	100	0.949
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	50.667	94.937	0.481
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	50.667	94.937	0.481
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	50.667	94.937	0.481
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	50.667	94.937	0.481
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	50.667	94.937	0.481
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	50.667	94.937	0.481
comX/sigX	Streptococcus mutans UA159	45.513	98.734	0.449
comX	Streptococcus sobrinus strain NIDR 6715-7	45.455	97.468	0.443
comX	Streptococcus thermophilus LMD-9	41.026	98.734	0.405
comX	Streptococcus thermophilus LMG 18311	41.026	98.734	0.405
comX/sigX	Streptococcus salivarius strain HSISS4	39.744	98.734	0.392
comX	Streptococcus salivarius SK126	39.744	98.734	0.392
comX/sigX	Streptococcus suis isolate S10	39.49	99.367	0.392
comX/sigX	Streptococcus suis P1/7	39.49	99.367	0.392
comX/sigX	Streptococcus suis D9	39.49	99.367	0.392
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	38.608	100	0.386
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	38.608	100	0.386