Detailed information NTG0409094

Bioinformatically predicted

Overview

• Name: comX/sigX
• Type: Regulator
• Locus tag: GP482_RS00440
• Genome accession: NZ_CP046875
• Coordinates: 84539..85015 (+)
• Length: 158 a.a.
• NCBI ID: WP_039696070.1
• Uniprot ID: A0A091BY39
• Organism: Streptococcus ruminicola strain CNU_77-61
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 79539..90015

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GP482_RS00440 (GP482_00440)	comX/sigX	84539..85015 (+)	477	WP_039696070.1	sigma-70 family RNA polymerase sigma factor	Regulator
GP482_RS00445 (GP482_00445)	-	85046..86404 (-)	1359	WP_158913178.1	aspartate kinase	-
GP482_RS00450 (GP482_00450)	-	86501..87148 (+)	648	WP_074565172.1	HAD family phosphatase	-
GP482_RS00455 (GP482_00455)	-	87339..88127 (+)	789	WP_039695989.1	enoyl-CoA hydratase	-
GP482_RS00460 (GP482_00460)	-	88243..88677 (+)	435	WP_039695988.1	MarR family transcriptional regulator	-
GP482_RS00465 (GP482_00465)	-	88680..89654 (+)	975	WP_158913180.1	beta-ketoacyl-ACP synthase III	-
GP482_RS00470 (GP482_00470)	-	89713..89937 (+)	225	WP_006531079.1	acyl carrier protein	-

Sequence

Protein

• Length: 158 a.a.
• Molecular weight: 19427.34 Da
• Isoelectric Point: 9.6123

>NTDB_id=409094 GP482_RS00440 WP_039696070.1 84539..85015(+) (comX/sigX) [Streptococcus ruminicola strain CNU_77-61]
MDFERYFQTVKPIILKLRRHYFVKLWDYEDWIQEGRIVFFQLLEEHPDLLINEGKRYSYFKTKFSNHVKDIIRHQESFKR
KFNRMPYEEIGDISHCVPQVSFFEVADYVAYQDSLARLRRTLGREDRLKLEKVIRGERFEGKKAFLKSIEPYFSDFRP

Nucleotide

• Length: 477 bp

>NTDB_id=409094 GP482_RS00440 WP_039696070.1 84539..85015(+) (comX/sigX) [Streptococcus ruminicola strain CNU_77-61]
GTGGATTTTGAACGCTATTTTCAAACCGTTAAACCAATTATTTTAAAATTACGCCGTCATTATTTTGTCAAACTTTGGGA
TTATGAAGATTGGATTCAAGAAGGTCGAATTGTTTTCTTTCAACTCTTAGAGGAGCATCCAGACCTCTTAATTAATGAAG
GCAAACGTTATAGTTACTTTAAAACAAAGTTTTCTAACCATGTTAAAGATATTATCCGCCATCAGGAATCCTTTAAACGG
AAATTTAATCGTATGCCTTATGAAGAAATTGGTGATATTAGTCACTGTGTGCCCCAGGTATCTTTCTTTGAAGTCGCAGA
TTACGTGGCTTATCAGGATAGCTTAGCACGTTTACGAAGAACATTGGGAAGAGAAGACCGACTAAAGTTGGAAAAAGTGA
TTCGTGGGGAACGTTTTGAAGGGAAGAAAGCCTTCTTAAAAAGCATCGAACCCTATTTCTCAGATTTTAGACCATAA

Domains

No domain identified.

3D structure

• AlphaFold DB: A0A091BY39

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	95.57	100	0.956
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	50.667	94.937	0.481
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	50.667	94.937	0.481
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	50.667	94.937	0.481
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	50.667	94.937	0.481
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	50.667	94.937	0.481
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	50.667	94.937	0.481
comX/sigX	Streptococcus mutans UA159	46.154	98.734	0.456
comX	Streptococcus sobrinus strain NIDR 6715-7	45.455	97.468	0.443
comX	Streptococcus thermophilus LMD-9	41.026	98.734	0.405
comX	Streptococcus thermophilus LMG 18311	41.026	98.734	0.405
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	39.241	100	0.392
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	39.241	100	0.392
comX/sigX	Streptococcus salivarius strain HSISS4	39.744	98.734	0.392
comX	Streptococcus salivarius SK126	39.744	98.734	0.392
comX/sigX	Streptococcus suis D9	38.854	99.367	0.386
comX/sigX	Streptococcus suis isolate S10	38.854	99.367	0.386
comX/sigX	Streptococcus suis P1/7	38.854	99.367	0.386