Detailed information NTG0397281

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: BR63_RS13045
• Genome accession: NZ_CP045798
• Coordinates: 2565823..2566215 (-)
• Length: 130 a.a.
• NCBI ID: WP_034422668.1
• Uniprot ID: A0A7G6E4Y7
• Organism: Thermanaerosceptrum fracticalcis strain DRI-13
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2560823..2571215

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BR63_RS13020 (BR63_12975)	rplI	2562222..2562671 (-)	450	WP_034422678.1	50S ribosomal protein L9	-
BR63_RS13025 (BR63_12980)	-	2562668..2563792 (-)	1125	WP_051965803.1	DHH family phosphoesterase	-
BR63_RS13030 (BR63_12985)	-	2563824..2564801 (-)	978	WP_153802092.1	YybS family protein	-
BR63_RS13035 (BR63_12990)	-	2564806..2565120 (-)	315	WP_034422673.1	MazG-like family protein	-
BR63_RS13040 (BR63_12995)	rpsR	2565568..2565798 (-)	231	WP_034422670.1	30S ribosomal protein S18	-
BR63_RS13045 (BR63_13000)	ssbA	2565823..2566215 (-)	393	WP_034422668.1	single-stranded DNA-binding protein	Machinery gene
BR63_RS13050 (BR63_13005)	rpsF	2566251..2566538 (-)	288	WP_034422664.1	30S ribosomal protein S6	-
BR63_RS13055 (BR63_13010)	-	2566752..2566964 (-)	213	WP_034422662.1	DUF951 domain-containing protein	-
BR63_RS13060 (BR63_13015)	-	2566970..2567878 (-)	909	WP_051965796.1	mechanosensitive ion channel family protein	-
BR63_RS13065 (BR63_13020)	-	2567856..2568746 (-)	891	WP_081908176.1	HEAT repeat domain-containing protein	-
BR63_RS13070 (BR63_13025)	-	2568820..2569548 (-)	729	WP_034422658.1	CvpA family protein	-
BR63_RS13075 (BR63_13030)	-	2569731..2570369 (-)	639	WP_034422657.1	TrkA C-terminal domain-containing protein	-

Sequence

Protein

• Length: 130 a.a.
• Molecular weight: 14564.31 Da
• Isoelectric Point: 4.9533

>NTDB_id=397281 BR63_RS13045 WP_034422668.1 2565823..2566215(-) (ssbA) [Thermanaerosceptrum fracticalcis strain DRI-13]
MLNRVILIGRLTKDPELRYTPSGTAVATFTLAVNRNRTNQEGEREADFIPIVVWQKQAENCANFIGKGSLVAIDGRLQVR
TYDGKDGQRRWVTEVVAENVRFLDRREGGGSQGISTFGSEVEFTDDDIPF

Nucleotide

• Length: 393 bp

>NTDB_id=397281 BR63_RS13045 WP_034422668.1 2565823..2566215(-) (ssbA) [Thermanaerosceptrum fracticalcis strain DRI-13]
GTGTTAAACAGGGTAATTCTAATCGGTCGCCTTACGAAAGATCCGGAATTACGATATACCCCAAGCGGCACGGCTGTAGC
AACTTTCACCCTGGCAGTGAACAGGAACAGAACCAATCAGGAGGGGGAAAGAGAAGCTGACTTCATCCCCATCGTCGTAT
GGCAAAAACAGGCGGAAAACTGTGCCAATTTTATTGGTAAAGGAAGCCTGGTAGCTATTGATGGCCGCCTCCAGGTTAGA
ACTTACGACGGTAAAGATGGCCAGCGCCGCTGGGTTACCGAAGTTGTAGCGGAGAATGTAAGGTTCCTTGACAGACGTGA
AGGTGGAGGCTCACAGGGAATAAGTACATTTGGCAGTGAAGTAGAGTTTACTGATGATGATATTCCCTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

3D structure

• AlphaFold DB: A0A7G6E4Y7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	69.811	81.538	0.569
ssb	Latilactobacillus sakei subsp. sakei 23K	61.321	81.538	0.5
ssbB	Streptococcus sobrinus strain NIDR 6715-7	43.382	100	0.454
ssbB	Bacillus subtilis subsp. subtilis str. 168	54.808	80	0.438
ssbB/cilA	Streptococcus mitis NCTC 12261	41.176	100	0.431
ssbB/cilA	Streptococcus pneumoniae TIGR4	41.176	100	0.431
ssbB/cilA	Streptococcus pneumoniae Rx1	40.441	100	0.423
ssbB/cilA	Streptococcus pneumoniae D39	40.441	100	0.423
ssbB/cilA	Streptococcus pneumoniae R6	40.441	100	0.423
ssbB/cilA	Streptococcus mitis SK321	40.441	100	0.423
ssbA	Streptococcus mutans UA159	40	100	0.415
ssb	Neisseria meningitidis MC58	38.4	96.154	0.369
ssb	Neisseria gonorrhoeae MS11	38.4	96.154	0.369