Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   FK538_RS10495 Genome accession   NZ_CP041295
Coordinates   2189469..2193965 (-) Length   1498 a.a.
NCBI ID   WP_168370677.1    Uniprot ID   -
Organism   Acinetobacter indicus strain 80-1-2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2184469..2198965
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FK538_RS10465 (FK538_10475) elsL 2185524..2186054 (-) 531 WP_005179524.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  FK538_RS10470 (FK538_10480) - 2186051..2186440 (-) 390 WP_075167111.1 YbaN family protein -
  FK538_RS10475 (FK538_10485) - 2186531..2187433 (+) 903 WP_075167112.1 DUF1853 family protein -
  FK538_RS10480 (FK538_10490) - 2187534..2187680 (+) 147 WP_005179532.1 entericidin A/B family lipoprotein -
  FK538_RS10485 (FK538_10495) dapE 2187808..2188941 (+) 1134 WP_168370676.1 succinyl-diaminopimelate desuccinylase -
  FK538_RS10490 (FK538_10500) - 2189011..2189472 (-) 462 WP_075167114.1 hypothetical protein -
  FK538_RS10495 (FK538_10505) chpA 2189469..2193965 (-) 4497 WP_168370677.1 Hpt domain-containing protein Regulator
  FK538_RS10500 (FK538_10510) - 2194122..2196194 (-) 2073 WP_075167116.1 methyl-accepting chemotaxis protein -
  FK538_RS10505 (FK538_10515) - 2196240..2196776 (-) 537 WP_005179538.1 chemotaxis protein CheW -
  FK538_RS10510 (FK538_10520) - 2196780..2197148 (-) 369 WP_005179539.1 PleD family two-component system response regulator -
  FK538_RS10515 (FK538_10525) pilG 2197165..2197548 (-) 384 WP_005179541.1 twitching motility response regulator PilG Regulator
  FK538_RS10520 (FK538_10530) - 2197830..2198471 (+) 642 WP_075167117.1 hypothetical protein -

Sequence

Protein


Download         Length: 1498 a.a.        Molecular weight: 166872.17 Da        Isoelectric Point: 4.2826

>NTDB_id=371049 FK538_RS10495 WP_168370677.1 2189469..2193965(-) (chpA) [Acinetobacter indicus strain 80-1-2]
MKEILKNLVETTALPEDSYLDQDAEILEIFVEEIEEIFVELKDLLAQWATQPNDQETLTTIRRHFHTLKGSGRMVGAKSA
GELAWTVEDTLNRVISGSLTLSAQVQQFATAVANVFEYKLYPSFKHAQPMALDLRPLVLLGQQLQQNLSPEPALEELLQL
ASSLTSSDSITGLEFDTASTDEQVAVDAELAVADSVEEDPLAAETLAIFIEEAEEHLLTVDRFLAHDELKTQDYNGLIRA
LHTLRGSSSMAHIEQIFDASSKVENLFKTLLQDEIESTSKETALLLQYAEFVRDYLHLLPQNDSAGMDQIYQTFNTAWQN
YGFSLEDVDESVNPQGLVSKLIELNIDQLLDAEFEFDQRAQAEYPEYIQTLSHQAKLLVERTDNRASQGIHDFTQELQLA
YAALLDKPSLLHSDYAFELFGQAHQEFIHLFDTLAAGQRVSLSEDAQQIINNLSAFVQQDIEALSSETGTTEAVTETAET
GAGLNLAVLSQRLEADRQYMDSAEANKDFDPDLLDIFLEEAEELLTGIDQDVNSWSQDPSNTAALNNLMRHLHTLKGGAN
MIAASHIGLIAHHLETIYERIINRQMSASTSLIQIIRLVQDNIADRIQTIREQQVDYPAQESLAILENISELAQGQLVEA
ESLAVAAEATSSADVQQSDASALEFELEQPAPAETAYTAPEDEQQPDTSSEPVLEDAPTLAEQTIPTDAVSTTENDGEDN
LHSIVEETFLEEAEELLDTTESLLKQWFDHRSDRSILLQLQRAAHSLKGGARMAEIEPVAVIAYQLENTFEQFAVHQFNS
NAYDALLNTTVAWLKEAIFQRDYSNFDSLKASLESIEYVNATAQLPERFNTADLLAPSKTFEFVQGDGAEPPSMQGEWSE
TAQLDNSNEMIRISADLVEKMIDLSGENAINRSRIEMELGQLGGTLNEMELAIKRLADQLRRMEGELESQIIAKHGDEHS
RYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLADKIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRMLPRLQRI
VRQTSSTLNRPAELVVHNTEGELDRTILERLISPFEHMLRNAVDHGLEDAAVRKQAAKPEVGQIELNIGRQGTDVLISFT
DDGKGIDETKIHAKALSLGLIQPEQQLDKKEILQLIFHPGFSTAQAVTQISGRGVGLDVVQSEIKALGGHVEVDSELGKG
TTFSIRVPTTVAVSDALMVKVGDQQFAIPLAQIDRIVRISPSALESYFSSKDDYFKIDQQNYKLRYLSEFVANQPLPRLS
NIAHSLPVLLIKGNTGQTIALLVDQLIGSRGQIVMKPIGQQFSSVGSIAGATILGDGQVCLILDGQNIARQIQATQRIKH
VMEPREVQRRDTRRLVMIVDDSVTVRKVTSRLLERQGFDVVTAKDGVDAIEQLENVKPDLMLLDIEMPRMDGFEVTNLVR
HHDIHRDLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIENILHSSEAKA

Nucleotide


Download         Length: 4497 bp        

>NTDB_id=371049 FK538_RS10495 WP_168370677.1 2189469..2193965(-) (chpA) [Acinetobacter indicus strain 80-1-2]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACGACTGCGCTTCCTGAAGATAGTTATCTTGATCAAGATGCAGAAATTCT
AGAAATTTTTGTTGAAGAAATTGAAGAAATCTTCGTTGAGCTAAAAGACCTGTTGGCTCAATGGGCCACGCAGCCTAACG
ATCAGGAAACGCTAACCACCATTCGCCGTCATTTTCATACCTTAAAAGGTTCGGGACGTATGGTTGGGGCCAAGTCGGCA
GGGGAGCTGGCCTGGACGGTTGAAGATACCTTAAACCGGGTCATTTCCGGTAGTTTGACCCTGTCAGCGCAGGTGCAGCA
GTTTGCAACCGCGGTGGCGAACGTCTTTGAATACAAACTTTATCCAAGCTTTAAACATGCCCAGCCGATGGCACTGGATC
TGCGTCCATTGGTGCTGTTAGGACAACAATTACAACAAAATTTAAGTCCTGAACCGGCCTTAGAAGAACTTCTACAACTG
GCGAGCAGCTTAACATCCAGCGACAGTATTACTGGTCTGGAGTTTGATACAGCAAGCACTGATGAGCAGGTTGCTGTAGA
TGCCGAGCTGGCTGTGGCTGATAGTGTTGAAGAAGATCCGCTAGCAGCTGAAACACTGGCCATCTTTATTGAAGAAGCAG
AAGAACACCTGTTAACGGTGGACCGCTTCCTGGCACACGATGAGCTGAAAACCCAAGATTACAATGGCCTGATTCGTGCC
CTGCATACCTTGCGCGGCAGTTCATCCATGGCACACATCGAGCAGATTTTTGATGCCAGCTCCAAGGTCGAAAACCTGTT
CAAGACCCTGTTACAGGATGAAATTGAATCGACCTCCAAAGAAACCGCACTGTTATTACAATATGCTGAATTTGTGCGGG
ATTATCTGCATCTGTTGCCGCAGAATGACAGTGCCGGCATGGACCAGATTTATCAGACTTTCAATACTGCATGGCAGAAC
TATGGCTTTAGCCTGGAAGATGTTGATGAATCAGTGAATCCGCAAGGTCTGGTATCCAAGCTGATTGAACTGAATATTGA
TCAGTTGCTCGATGCTGAGTTCGAATTTGACCAGCGCGCGCAGGCTGAATATCCGGAATATATCCAGACCCTGAGCCATC
AGGCGAAGCTGCTGGTAGAGCGTACCGATAACCGCGCCTCTCAGGGTATTCATGATTTTACCCAGGAATTACAACTGGCC
TATGCGGCCTTGCTGGACAAGCCAAGCCTGCTGCATAGCGATTATGCCTTTGAATTATTTGGACAGGCGCATCAGGAATT
TATCCATCTGTTTGATACCCTGGCTGCCGGACAACGCGTCAGCTTAAGCGAAGACGCCCAGCAGATCATCAATAACCTGA
GTGCCTTTGTACAGCAGGATATTGAAGCGCTAAGCTCAGAAACTGGCACCACAGAAGCTGTAACCGAAACGGCTGAAACC
GGTGCAGGGCTGAATCTGGCCGTATTGTCACAGCGTCTGGAAGCTGACCGTCAATACATGGATAGCGCTGAAGCCAACAA
GGACTTTGATCCAGACCTGCTGGACATTTTCCTGGAAGAGGCCGAAGAGTTACTTACGGGTATTGACCAGGATGTTAACA
GCTGGAGCCAAGACCCGAGCAATACTGCTGCGCTGAACAATCTGATGCGCCATTTGCACACCTTAAAAGGTGGTGCCAAC
ATGATTGCAGCCAGCCATATCGGTCTGATTGCGCACCATTTAGAAACCATTTATGAGCGCATCATTAACCGTCAGATGAG
CGCATCGACCTCATTGATTCAGATTATCCGTCTGGTTCAGGACAATATTGCGGACCGTATCCAGACCATCCGTGAACAGC
AGGTCGATTATCCGGCGCAAGAATCACTGGCGATTCTGGAAAATATTAGCGAACTGGCCCAAGGTCAACTGGTTGAAGCT
GAATCGCTGGCAGTGGCGGCTGAAGCAACCTCTAGCGCAGATGTACAACAGTCTGATGCATCTGCACTTGAGTTTGAACT
GGAACAGCCAGCACCTGCAGAAACAGCCTATACTGCGCCTGAAGATGAGCAGCAGCCAGATACTAGCAGCGAACCGGTAC
TGGAAGATGCACCGACCCTGGCTGAGCAAACCATCCCTACAGATGCGGTATCTACTACTGAAAATGACGGTGAAGACAAT
CTGCATTCGATTGTGGAAGAAACCTTCCTGGAAGAAGCTGAAGAGCTGCTCGACACCACAGAAAGCCTGTTAAAGCAGTG
GTTTGACCATCGTAGTGACCGAAGCATTTTGCTGCAGTTACAACGTGCTGCGCACAGCCTGAAAGGCGGCGCGCGTATGG
CCGAAATCGAGCCGGTGGCCGTGATTGCCTATCAGCTGGAAAATACCTTTGAACAGTTCGCGGTGCATCAGTTCAATTCC
AATGCCTATGATGCCTTGCTCAACACCACTGTGGCTTGGTTAAAAGAAGCCATCTTCCAGCGCGATTACAGCAATTTTGA
TAGCCTGAAAGCCAGCCTGGAGTCGATTGAATACGTCAATGCGACGGCGCAGCTGCCAGAACGCTTCAATACCGCCGATC
TGCTGGCGCCAAGCAAAACCTTCGAATTTGTGCAGGGTGATGGTGCCGAGCCGCCATCCATGCAGGGCGAATGGAGCGAA
ACCGCACAGCTGGATAACAGCAATGAGATGATCCGTATTTCGGCTGATCTGGTTGAGAAGATGATTGACCTGTCGGGTGA
AAACGCGATTAACCGCTCGCGAATCGAGATGGAGCTGGGTCAGCTGGGCGGTACCCTGAATGAAATGGAACTGGCGATTA
AACGTCTGGCCGATCAGTTACGCCGAATGGAAGGCGAGCTGGAAAGCCAGATTATTGCCAAACATGGTGATGAACATTCA
CGCTATACCGACTTCGACCCGCTGGAGATGGACCAGTATTCATCCTTGAACCAGCTGTCGAAATCGTTGGCGGAATCGGC
GTCGGACTTGGTGGACTTTAAGACCACGCTGGCGGACAAGATTCGTGATGCTGAAGGTCTGTTACTGCAACAGTCGCGGA
TTCAGGCAGAAATTCAGGAAAGCCTGATGCGCACCCGTCTGGTACCGTTCTCGCGCATGTTGCCACGTTTACAGCGGATT
GTGCGTCAGACTTCATCGACCTTAAACCGTCCTGCCGAGCTGGTGGTACACAATACCGAAGGCGAGCTGGACCGGACCAT
TTTGGAACGCCTGATTTCACCGTTTGAACACATGCTGCGTAATGCGGTGGACCATGGCCTGGAAGATGCCGCTGTACGTA
AACAGGCAGCGAAGCCGGAAGTGGGCCAGATTGAGCTGAACATTGGCCGTCAGGGCACTGATGTACTGATTAGCTTTACC
GATGATGGTAAGGGGATTGATGAAACCAAAATTCACGCCAAAGCCCTGAGCCTTGGCCTGATTCAGCCAGAGCAACAGCT
GGACAAGAAGGAAATTCTGCAGCTGATTTTCCATCCGGGCTTTAGTACCGCACAGGCCGTGACCCAGATTTCGGGTCGTG
GCGTCGGTCTGGACGTGGTGCAAAGCGAAATTAAAGCGCTGGGCGGCCATGTCGAGGTCGATTCTGAACTCGGTAAAGGC
ACTACTTTCAGTATTCGCGTACCGACCACAGTGGCGGTATCCGATGCCTTGATGGTAAAAGTTGGCGATCAGCAGTTCGC
AATTCCATTGGCGCAAATTGACCGTATTGTACGAATTTCACCTTCTGCGCTGGAAAGTTACTTCAGCAGCAAAGATGACT
ACTTCAAGATTGATCAGCAAAACTATAAGTTGCGCTATCTGTCCGAGTTTGTTGCCAATCAGCCATTGCCGCGTTTAAGC
AATATCGCGCATTCATTGCCGGTGCTGCTGATTAAAGGCAATACTGGTCAGACCATTGCCTTACTGGTCGATCAGCTGAT
TGGTTCACGTGGCCAGATTGTGATGAAACCGATTGGCCAGCAGTTCTCCAGCGTGGGTTCGATTGCCGGCGCGACCATTC
TCGGTGATGGTCAGGTCTGTCTGATTCTGGATGGTCAGAATATTGCCCGTCAGATTCAGGCAACCCAGCGCATCAAGCAT
GTGATGGAGCCGCGTGAAGTACAGCGTCGTGATACCCGTCGTCTGGTGATGATTGTGGATGACTCGGTGACCGTACGTAA
GGTCACGTCACGTCTGCTCGAGCGTCAGGGCTTTGATGTGGTCACGGCCAAAGACGGTGTCGATGCGATTGAGCAGCTGG
AAAATGTTAAACCGGATCTGATGCTGCTGGATATTGAAATGCCGCGTATGGATGGCTTTGAGGTGACCAACCTGGTACGC
CACCATGACATCCATCGTGACTTGCCAATTATCATGATTACCTCGCGTACCGGTGAAAAACACCGCGAACGTGCCTTTAG
CTTGGGGGTAACGCACTATATGGGTAAACCGTTCCAGGAAGCAGAATTGCTTGCCAATATTGAAAACATTTTGCATAGCA
GTGAGGCTAAAGCATGA

Domains

Predicted by InterproScan.

CheW-like domain (CheW)

(1216-1351)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1074-1209)

Hpt domain (Hpt)

(727-791)

Hpt domain (Hpt)

(204-284)

Hpt domain (Hpt)

(512-598)

Hpt domain (Hpt)

(25-111)

Response regulator receiver domain (Response_reg)

(1376-1487)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.838

100

0.62

Multiple sequence alignment