Detailed information NTG0367389

Bioinformatically predicted

Overview

• Name: comX/sigX
• Type: Regulator
• Locus tag: FHI56_RS11435
• Genome accession: NZ_CP040804
• Coordinates: 2223690..2224187 (-)
• Length: 165 a.a.
• NCBI ID: WP_013989953.1
• Uniprot ID: A0AB37CJC1
• Organism: Streptococcus salivarius strain LAB813
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	2224444..2224917	2223690..2224187	flank	257

Gene organization within MGE regions

Location: 2223690..2224917

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FHI56_RS11435 (FHI56_11435)	comX/sigX	2223690..2224187 (-)	498	WP_013989953.1	sigma factor	Regulator
FHI56_RS11440 (FHI56_11440)	tnpA	2224444..2224917 (-)	474	WP_013990678.1	IS200/IS605 family transposase	-

Sequence

Protein

• Length: 165 a.a.
• Molecular weight: 19989.79 Da
• Isoelectric Point: 4.9953

>NTDB_id=367389 FHI56_RS11435 WP_013989953.1 2223690..2224187(-) (comX/sigX) [Streptococcus salivarius strain LAB813]
MEQEIFVHAYEVVRPIVLKASRQYFIQLWDQADMEQEAMMTLYQLLEKFPELKSDDDKLRRYFKTKFRNRLNDEVRRQES
VKRQANRQCYIEISDIAFCLPNKELDAVDRLVYDEQLNAFRNQLSSEDATKLDRLLAGECFRGRKKMIRELKVWMVDFDP
YNEDD

Nucleotide

• Length: 498 bp

>NTDB_id=367389 FHI56_RS11435 WP_013989953.1 2223690..2224187(-) (comX/sigX) [Streptococcus salivarius strain LAB813]
ATGGAACAAGAAATTTTTGTTCACGCATATGAAGTTGTAAGGCCGATTGTACTTAAGGCTAGTAGACAATATTTCATCCA
ACTTTGGGACCAAGCTGATATGGAGCAAGAGGCTATGATGACGCTTTATCAGCTTTTAGAAAAGTTTCCTGAATTAAAGT
CTGATGATGATAAGCTACGGCGTTATTTTAAAACGAAATTTAGGAATAGACTTAATGATGAGGTTAGAAGGCAGGAGTCT
GTAAAACGACAAGCTAATCGACAATGTTATATCGAAATTTCAGATATTGCTTTTTGTCTTCCGAATAAAGAGTTAGATGC
TGTTGATAGGCTTGTTTATGATGAGCAGCTTAATGCTTTCCGTAATCAGTTGTCTTCGGAAGATGCTACTAAGTTAGACC
GTTTGCTAGCTGGGGAGTGTTTTAGAGGTCGAAAAAAGATGATTCGAGAGTTAAAAGTTTGGATGGTTGATTTTGATCCT
TACAATGAAGATGATTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/sigX	Streptococcus salivarius strain HSISS4	98.788	100	0.988
comX	Streptococcus salivarius SK126	98.182	100	0.982
comX	Streptococcus thermophilus LMD-9	87.879	100	0.879
comX	Streptococcus thermophilus LMG 18311	87.879	100	0.879
comX	Streptococcus sobrinus strain NIDR 6715-7	41.975	98.182	0.412
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	43.226	93.939	0.406
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	43.226	93.939	0.406
comX/sigX	Streptococcus mutans UA159	41.667	94.545	0.394
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	41.026	94.545	0.388
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	42.667	90.909	0.388
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	42.667	90.909	0.388
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	42.667	90.909	0.388
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	42.667	90.909	0.388
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	42	90.909	0.382
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	42	90.909	0.382
comX/sigX	Streptococcus suis D9	39.869	92.727	0.37
comX/sigX	Streptococcus suis isolate S10	39.869	92.727	0.37
comX/sigX	Streptococcus suis P1/7	39.869	92.727	0.37