Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   F1538_RS07575 Genome accession   NZ_CP043771
Coordinates   1518018..1518521 (-) Length   167 a.a.
NCBI ID   WP_011272085.1    Uniprot ID   Q4QN52
Organism   Haemophilus influenzae biotype aegyptius strain HE15/F3028     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1513018..1523521
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F1538_RS07550 (F1538_07560) - 1513149..1514201 (+) 1053 WP_013526436.1 extracellular solute-binding protein -
  F1538_RS07555 (F1538_07565) hslU 1514271..1515605 (-) 1335 WP_013526437.1 HslU--HslV peptidase ATPase subunit -
  F1538_RS07560 (F1538_07570) hslV 1515616..1516143 (-) 528 WP_005656555.1 ATP-dependent protease subunit HslV -
  F1538_RS07565 (F1538_07575) aphA 1516365..1517072 (+) 708 WP_005649426.1 acid phosphatase AphA -
  F1538_RS07570 (F1538_07580) - 1517119..1517917 (-) 799 Protein_1458 IS3 family transposase -
  F1538_RS07575 (F1538_07585) luxS 1518018..1518521 (-) 504 WP_011272085.1 S-ribosylhomocysteine lyase Regulator
  F1538_RS07580 (F1538_07590) - 1518706..1519179 (-) 474 WP_005691326.1 YqaA family protein -
  F1538_RS07585 (F1538_07595) - 1519179..1519781 (-) 603 WP_013526439.1 beta-phosphoglucomutase family hydrolase -
  F1538_RS07590 (F1538_07600) - 1519897..1520274 (+) 378 WP_005691328.1 PRD domain-containing protein -
  F1538_RS07595 (F1538_07605) rsmG 1520414..1521025 (+) 612 WP_005659754.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  F1538_RS07600 (F1538_07610) - 1521151..1521525 (+) 375 WP_013526440.1 ATP synthase subunit I -
  F1538_RS07605 (F1538_07615) atpB 1521562..1522350 (+) 789 WP_005629251.1 F0F1 ATP synthase subunit A -
  F1538_RS07610 (F1538_07620) atpE 1522406..1522660 (+) 255 WP_005629249.1 F0F1 ATP synthase subunit C -
  F1538_RS07615 (F1538_07625) atpF 1522710..1523180 (+) 471 WP_005629246.1 F0F1 ATP synthase subunit B -

Sequence

Protein


Download         Length: 167 a.a.        Molecular weight: 18518.17 Da        Isoelectric Point: 4.8168

>NTDB_id=338650 F1538_RS07575 WP_011272085.1 1518018..1518521(-) (luxS) [Haemophilus influenzae biotype aegyptius strain HE15/F3028]
MPLLDSFKVDHTKMNAPAVRIAKTMCTPKGDNITVFDLRFCIPNKEILSPKGIHTLEHLFAGFMRDHLNGDSIEIIDISP
MGCRTGFYMSLIGTPNEQEVSEAWLASMQDVLGVQDQASIPELNIYQCGSYTEHSLEDAHEIAKNVIARGIGVNKNEDLS
LDNSLLK

Nucleotide


Download         Length: 504 bp        

>NTDB_id=338650 F1538_RS07575 WP_011272085.1 1518018..1518521(-) (luxS) [Haemophilus influenzae biotype aegyptius strain HE15/F3028]
ATGCCATTACTTGATAGTTTTAAAGTGGATCACACAAAAATGAACGCACCTGCAGTACGCATTGCAAAAACGATGTGCAC
GCCAAAAGGCGATAATATTACTGTTTTTGATTTACGTTTTTGTATTCCAAACAAAGAAATTCTTTCCCCAAAAGGCATTC
ATACACTTGAACATTTATTTGCTGGATTTATGCGCGATCACTTAAATGGCGATAGCATAGAAATTATTGATATTTCTCCG
ATGGGATGTCGCACGGGATTTTATATGTCTTTGATTGGCACACCAAATGAACAGGAAGTGTCTGAGGCTTGGTTAGCTTC
AATGCAAGATGTTTTAGGTGTACAAGATCAAGCTTCTATTCCCGAATTAAATATCTATCAATGCGGAAGCTATACGGAAC
ATTCCTTAGAAGATGCACACGAAATTGCCAAAAATGTTATCGCACGCGGTATAGGTGTAAATAAAAATGAAGATTTGTCA
CTCGATAATTCCTTATTAAAATAG

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(4-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q4QN52

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

74.096

99.401

0.737

Multiple sequence alignment