Detailed information NTG0338262

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: CPH39_RS00895
• Genome accession: NZ_CP043542
• Coordinates: 200928..201911 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196496.1
• Uniprot ID: Q3YVS2
• Organism: Escherichia coli strain F2_81
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 195928..206911

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CPH39_RS00880 (CPH39_00880)	dppA	197228..198835 (+)	1608	WP_053884414.1	dipeptide ABC transporter substrate-binding protein DppA	-
CPH39_RS00885 (CPH39_00890)	dppB	198986..200005 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
CPH39_RS00890 (CPH39_00895)	dppC	200015..200917 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
CPH39_RS00895 (CPH39_00900)	amiE	200928..201911 (+)	984	WP_001196496.1	dipeptide ABC transporter ATP-binding protein	Regulator
CPH39_RS00900 (CPH39_00905)	dppF	201908..202912 (+)	1005	WP_000107036.1	dipeptide ABC transporter ATP-binding subunit DppF	-
CPH39_RS00905 (CPH39_00910)	yhjV	202942..204213 (-)	1272	WP_053884416.1	aromatic amino acid transport family protein	-
CPH39_RS00910 (CPH39_00920)	ldrD	204689..204796 (+)	108	WP_072193518.1	type I toxin-antitoxin system toxin Ldr family protein	-
CPH39_RS00915 (CPH39_00925)	bcsG	204883..206562 (-)	1680	WP_053884417.1	cellulose biosynthesis protein BcsG	-
CPH39_RS00920 (CPH39_00930)	bcsF	206559..206750 (-)	192	WP_053884418.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35814.38 Da
• Isoelectric Point: 6.7584

>NTDB_id=338262 CPH39_RS00895 WP_001196496.1 200928..201911(+) (amiE) [Escherichia coli strain F2_81]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=338262 CPH39_RS00895 WP_001196496.1 200928..201911(+) (amiE) [Escherichia coli strain F2_81]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGTGTTTAACGGTCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTAAC
CATTCAGGCGCAAATCATCGAACTGCTGCTGGAGCTACAGCAAAAAGAGAACATGGCGCTGGTGTTAATTACCCATGATC
TGGCTCTGGTGGCGGAAGCTGCGCATAAAATCATTGTGATGTATGCCGGTCAAGTGGTGGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACACAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: Q3YVS2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401