Detailed information NTG0026743

Bioinformatically predicted

Overview

• Name: pilT
• Type: Machinery gene
• Locus tag: SFUM_RS08760
• Genome accession: NC_008554
• Coordinates: 2072658..2073740 (-)
• Length: 360 a.a.
• NCBI ID: WP_011698552.1
• Uniprot ID: -
• Organism: Syntrophobacter fumaroxidans MPOB
• Function: type IV pilus retraction (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2067658..2078740

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SFUM_RS08740 (Sfum_1691)	-	2067885..2069015 (+)	1131	WP_041440195.1	patatin-like phospholipase family protein	-
SFUM_RS08745 (Sfum_1692)	thiD	2068994..2069845 (-)	852	WP_011698549.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
SFUM_RS08750 (Sfum_1693)	thiL	2070021..2071043 (-)	1023	WP_011698550.1	thiamine-phosphate kinase	-
SFUM_RS08755 (Sfum_1694)	-	2071422..2072591 (-)	1170	WP_011698551.1	PilT/PilU family type 4a pilus ATPase	-
SFUM_RS08760 (Sfum_1695)	pilT	2072658..2073740 (-)	1083	WP_011698552.1	type IV pilus twitching motility protein PilT	Machinery gene
SFUM_RS08765 (Sfum_1696)	-	2073879..2074694 (-)	816	WP_208597127.1	radical SAM protein	-
SFUM_RS08770 (Sfum_1697)	-	2075061..2075696 (-)	636	WP_011698554.1	MBL fold metallo-hydrolase	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 40534.72 Da
• Isoelectric Point: 7.2507

>NTDB_id=26743 SFUM_RS08760 WP_011698552.1 2072658..2073740(-) (pilT) [Syntrophobacter fumaroxidans MPOB]
MARIDAFFKLMNDQKASDLHLVSGQQPVLRIRGDLERIKYKVLDDDELRSMLYEITPEDRIKTFEETGDLDFAYEIKGLA
RYRANYFMQKNGIGAVFREIPSEILSVEQLGLPPVVSRLSMLPRGMVLVTGPTGCGKSTTLASIIDEANRKRKDHIITIE
DPIEFVHTSKNCVVNHRELGTHTRSFSNALRAALREDPDIILVGEMRDLETIRLAIEAAATGHLVFSTLHTTSAWKTVDR
IIEVFPTGEQAQIRSTLADGIRAVVSQALFKRIDIKGRIPVLEILIATHAVRAMIRESKTHQIPSAMQTGRKYGMQTLDD
GIFAHLKAGRVSPGESYMKCVDKEKFRPYLTEPPEDFTEV

Nucleotide

• Length: 1083 bp

>NTDB_id=26743 SFUM_RS08760 WP_011698552.1 2072658..2073740(-) (pilT) [Syntrophobacter fumaroxidans MPOB]
ATGGCGAGGATTGACGCGTTTTTCAAGCTGATGAACGACCAGAAAGCTTCGGACCTTCATCTGGTTTCCGGCCAGCAGCC
GGTATTGAGGATCCGGGGGGATCTGGAACGGATCAAGTACAAGGTCCTGGATGACGACGAGTTGCGCTCCATGCTCTACG
AGATCACTCCGGAGGATCGAATCAAGACGTTCGAGGAAACCGGTGATCTGGATTTTGCATATGAAATCAAGGGGCTGGCT
CGTTACCGCGCCAACTATTTCATGCAAAAGAACGGCATCGGGGCGGTATTCCGCGAAATTCCAAGCGAGATCCTTTCAGT
GGAGCAGCTGGGGTTGCCTCCTGTGGTGAGCCGCCTGTCGATGCTTCCGCGAGGCATGGTTTTGGTGACCGGGCCCACCG
GCTGCGGGAAATCGACGACTCTGGCTTCCATCATCGACGAGGCGAACCGGAAGCGCAAGGACCACATCATCACGATCGAA
GACCCCATCGAATTCGTGCATACCAGCAAGAACTGCGTGGTGAACCATCGGGAGTTGGGCACGCATACCCGATCCTTTTC
GAACGCCCTGCGGGCTGCCCTCCGCGAAGATCCGGACATCATCCTGGTGGGCGAAATGCGCGATCTCGAAACCATTCGTC
TTGCCATTGAAGCCGCGGCCACGGGGCATCTTGTCTTCTCGACGCTGCACACGACCAGCGCATGGAAGACGGTCGACCGC
ATCATCGAGGTATTCCCCACGGGAGAACAGGCTCAGATCCGATCGACTCTGGCCGACGGCATCCGGGCCGTCGTCTCGCA
GGCTCTATTCAAGCGAATCGACATCAAAGGCCGCATCCCCGTCCTGGAAATACTCATTGCAACACATGCCGTGCGGGCGA
TGATCCGCGAGTCCAAGACCCATCAGATTCCCTCCGCGATGCAAACGGGAAGAAAGTACGGGATGCAGACGCTCGACGAC
GGTATTTTCGCACACCTCAAGGCGGGTCGGGTCAGCCCGGGCGAGTCCTACATGAAGTGCGTGGACAAGGAAAAATTCCG
TCCTTACCTGACGGAGCCGCCCGAGGATTTTACGGAAGTATAG

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (13-256)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilT	Pseudomonas aeruginosa PAK	53.153	92.5	0.492
pilT	Pseudomonas stutzeri DSM 10701	52.553	92.5	0.486
pilT	Legionella pneumophila strain ERS1305867	51.652	92.5	0.478
pilT	Legionella pneumophila strain Lp02	51.652	92.5	0.478
pilT	Neisseria meningitidis 8013	50.751	92.5	0.469
pilT	Neisseria gonorrhoeae MS11	50.45	92.5	0.467
pilT	Acinetobacter baylyi ADP1	51.077	90.278	0.461
pilT	Acinetobacter nosocomialis M2	50.151	91.944	0.461
pilT	Acinetobacter baumannii D1279779	50.151	91.944	0.461
pilT	Acinetobacter baumannii strain A118	50.151	91.944	0.461
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	46.356	95.278	0.442
pilT	Vibrio cholerae O1 biovar El Tor strain E7946	48.693	85	0.414
pilT	Vibrio cholerae strain A1552	48.693	85	0.414