Detailed information
Bioinformatically predicted
Overview
| Name | Cj0011c | Type | Machinery gene |
| Locus tag | CAV_RS00865 | Genome accession | NZ_CP022347 |
| Coordinates | 166275..166514 (+) | Length | 79 a.a. |
| NCBI ID | WP_094324639.1 | Uniprot ID | A0A222MVY5 |
| Organism | Campylobacter avium LMG 24591 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 161275..171514
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CAV_RS00840 (CAV_0165) | trpS | 162362..163321 (-) | 960 | WP_094324634.1 | tryptophan--tRNA ligase | - |
| CAV_RS00845 (CAV_0166) | - | 163318..163812 (-) | 495 | WP_094324635.1 | shikimate kinase | - |
| CAV_RS00850 (CAV_0167) | der | 163802..165163 (-) | 1362 | WP_094324636.1 | ribosome biogenesis GTPase Der | - |
| CAV_RS00855 (CAV_0168) | - | 165166..165495 (-) | 330 | WP_094324637.1 | dihydroneopterin aldolase | - |
| CAV_RS00860 (CAV_0169) | - | 165496..166137 (-) | 642 | WP_094324638.1 | alpha/beta hydrolase | - |
| CAV_RS00865 (CAV_0170) | Cj0011c | 166275..166514 (+) | 240 | WP_094324639.1 | ComEA family DNA-binding protein | Machinery gene |
| CAV_RS09175 (CAV_0171) | - | 166593..168698 (+) | 2106 | WP_281248827.1 | methyl-accepting chemotaxis protein | - |
| CAV_RS00875 (CAV_0172) | - | 168727..169347 (-) | 621 | WP_094324640.1 | NAD(P)H-binding protein | - |
| CAV_RS00880 (CAV_0173) | - | 169512..169850 (+) | 339 | WP_094324641.1 | helix-turn-helix domain-containing protein | - |
| CAV_RS00885 (CAV_0174) | - | 169851..170678 (+) | 828 | WP_094324642.1 | DUF817 domain-containing protein | - |
Sequence
Protein
Download Length: 79 a.a. Molecular weight: 8675.19 Da Isoelectric Point: 9.0580
>NTDB_id=238567 CAV_RS00865 WP_094324639.1 166275..166514(+) (Cj0011c) [Campylobacter avium LMG 24591]
MSKFLVLLLCLSGFLFAAVNINTATVEELQSLKGIGKSKAEAIVAYRNEQNFTSIDDIKKVKGIGPKLFESIKQDITVQ
MSKFLVLLLCLSGFLFAAVNINTATVEELQSLKGIGKSKAEAIVAYRNEQNFTSIDDIKKVKGIGPKLFESIKQDITVQ
Nucleotide
Download Length: 240 bp
>NTDB_id=238567 CAV_RS00865 WP_094324639.1 166275..166514(+) (Cj0011c) [Campylobacter avium LMG 24591]
ATGAGTAAATTTTTAGTCCTTTTGCTATGTTTATCTGGATTTTTGTTCGCTGCTGTAAATATCAACACAGCTACAGTTGA
GGAGCTACAAAGCTTAAAAGGTATTGGTAAAAGCAAGGCCGAGGCTATAGTTGCTTATAGAAATGAGCAAAATTTCACTT
CAATAGACGATATAAAAAAGGTTAAAGGCATAGGCCCTAAACTTTTTGAAAGTATCAAGCAAGATATAACAGTTCAGTAA
ATGAGTAAATTTTTAGTCCTTTTGCTATGTTTATCTGGATTTTTGTTCGCTGCTGTAAATATCAACACAGCTACAGTTGA
GGAGCTACAAAGCTTAAAAGGTATTGGTAAAAGCAAGGCCGAGGCTATAGTTGCTTATAGAAATGAGCAAAATTTCACTT
CAATAGACGATATAAAAAAGGTTAAAGGCATAGGCCCTAAACTTTTTGAAAGTATCAAGCAAGATATAACAGTTCAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| Cj0011c | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.089 |
100 |
0.671 |
| comEA | Bacillus subtilis subsp. subtilis str. 168 |
61.765 |
86.076 |
0.532 |
| comE | Neisseria gonorrhoeae MS11 |
46.914 |
100 |
0.481 |
| comE | Neisseria gonorrhoeae MS11 |
46.914 |
100 |
0.481 |
| comE | Neisseria gonorrhoeae MS11 |
46.914 |
100 |
0.481 |
| comE | Neisseria gonorrhoeae MS11 |
46.914 |
100 |
0.481 |
| comEA | Staphylococcus aureus MW2 |
55.738 |
77.215 |
0.43 |
| comEA | Staphylococcus aureus N315 |
55.738 |
77.215 |
0.43 |
| comEA | Vibrio cholerae C6706 |
66 |
63.291 |
0.418 |
| comEA | Vibrio cholerae strain A1552 |
66 |
63.291 |
0.418 |
| comEA | Latilactobacillus sakei subsp. sakei 23K |
50.794 |
79.747 |
0.405 |
| comEA | Acinetobacter baylyi ADP1 |
52.459 |
77.215 |
0.405 |
| comEA | Acinetobacter baumannii D1279779 |
53.448 |
73.418 |
0.392 |
| comEA | Acinetobacter baumannii strain A118 |
49.18 |
77.215 |
0.38 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
48.333 |
75.949 |
0.367 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
45.312 |
81.013 |
0.367 |