Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | BJD11_RS05995 | Genome accession | NZ_CP018467 |
| Coordinates | 829792..830220 (+) | Length | 142 a.a. |
| NCBI ID | WP_011348339.1 | Uniprot ID | Q3BQ79 |
| Organism | Xanthomonas euvesicatoria strain LMG930 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 824792..835220
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJD11_RS05980 (BJD11_05985) | coaE | 826693..827304 (-) | 612 | WP_011348341.1 | dephospho-CoA kinase | - |
| BJD11_RS05985 (BJD11_05990) | - | 827318..828181 (-) | 864 | WP_008576868.1 | A24 family peptidase | - |
| BJD11_RS05990 (BJD11_05995) | pilC | 828188..829450 (-) | 1263 | WP_011348340.1 | type II secretion system F family protein | Machinery gene |
| BJD11_RS05995 (BJD11_06000) | pilA | 829792..830220 (+) | 429 | WP_011348339.1 | pilin | Machinery gene |
| BJD11_RS06000 (BJD11_06005) | pilB | 830378..832087 (+) | 1710 | WP_039416953.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| BJD11_RS06005 (BJD11_06010) | pilR | 832302..833756 (-) | 1455 | WP_011348337.1 | sigma-54 dependent transcriptional regulator | Regulator |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 14343.43 Da Isoelectric Point: 9.1206
>NTDB_id=208819 BJD11_RS05995 WP_011348339.1 829792..830220(+) (pilA) [Xanthomonas euvesicatoria strain LMG930]
MKKQNGFTLIELMIVVAIIAILAAIALPAYQDYTVRGRVSEAMVAASAAKTVVAENAANGSALNSGWTAPTATNNVASVA
VAAATGNITVTTTDKAGGGTIIFAPTANGAALTSGTVPTDRISWDCKGGTLVAKYRPAECRT
MKKQNGFTLIELMIVVAIIAILAAIALPAYQDYTVRGRVSEAMVAASAAKTVVAENAANGSALNSGWTAPTATNNVASVA
VAAATGNITVTTTDKAGGGTIIFAPTANGAALTSGTVPTDRISWDCKGGTLVAKYRPAECRT
Nucleotide
Download Length: 429 bp
>NTDB_id=208819 BJD11_RS05995 WP_011348339.1 829792..830220(+) (pilA) [Xanthomonas euvesicatoria strain LMG930]
ATGAAGAAGCAAAACGGCTTTACCCTTATCGAACTGATGATCGTTGTCGCGATCATCGCAATCCTTGCCGCCATCGCGTT
GCCGGCCTACCAGGACTACACCGTTCGCGGCCGCGTCTCTGAAGCGATGGTTGCCGCGTCTGCCGCCAAGACGGTGGTGG
CCGAAAATGCCGCCAACGGCTCTGCCCTGAATAGCGGGTGGACCGCTCCTACGGCGACCAATAATGTTGCCAGCGTAGCC
GTTGCTGCCGCTACGGGCAATATTACTGTGACCACTACCGATAAGGCCGGCGGCGGCACGATCATTTTTGCTCCCACCGC
TAACGGCGCTGCGCTGACTTCCGGCACCGTTCCTACCGATCGCATTTCGTGGGATTGCAAGGGTGGCACCTTGGTTGCCA
AGTACCGTCCGGCTGAATGCCGTACCTAA
ATGAAGAAGCAAAACGGCTTTACCCTTATCGAACTGATGATCGTTGTCGCGATCATCGCAATCCTTGCCGCCATCGCGTT
GCCGGCCTACCAGGACTACACCGTTCGCGGCCGCGTCTCTGAAGCGATGGTTGCCGCGTCTGCCGCCAAGACGGTGGTGG
CCGAAAATGCCGCCAACGGCTCTGCCCTGAATAGCGGGTGGACCGCTCCTACGGCGACCAATAATGTTGCCAGCGTAGCC
GTTGCTGCCGCTACGGGCAATATTACTGTGACCACTACCGATAAGGCCGGCGGCGGCACGATCATTTTTGCTCCCACCGC
TAACGGCGCTGCGCTGACTTCCGGCACCGTTCCTACCGATCGCATTTCGTGGGATTGCAAGGGTGGCACCTTGGTTGCCA
AGTACCGTCCGGCTGAATGCCGTACCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Ralstonia pseudosolanacearum GMI1000 |
51.572 |
100 |
0.577 |
| pilA2 | Legionella pneumophila str. Paris |
54.795 |
100 |
0.563 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
54.795 |
100 |
0.563 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
39.894 |
100 |
0.528 |
| comP | Acinetobacter baylyi ADP1 |
47.468 |
100 |
0.528 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
41.096 |
100 |
0.423 |
| pilA | Acinetobacter baumannii strain A118 |
39.716 |
99.296 |
0.394 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
38.571 |
98.592 |
0.38 |
| pilA | Vibrio cholerae C6706 |
33.766 |
100 |
0.366 |
| pilA | Vibrio cholerae strain A1552 |
33.766 |
100 |
0.366 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
33.766 |
100 |
0.366 |