Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | PA4525 | Genome accession | NC_002516 |
| Coordinates | 5069082..5069531 (-) | Length | 149 a.a. |
| NCBI ID | NP_253215.1 | Uniprot ID | P04739 |
| Organism | Pseudomonas aeruginosa PAO1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5064082..5074531
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PA4522 | ampD | 5064774..5065340 (-) | 567 | NP_253212.1 | N-acetyl-anhydromuranmyl-L-alanine amidase | - |
| PA4523 | - | 5065491..5067746 (-) | 2256 | NP_253213.1 | hypothetical protein | - |
| PA4524 | nadC | 5068032..5068880 (+) | 849 | NP_253214.1 | nicotinate-nucleotide pyrophosphorylase | - |
| PA4525 | pilA | 5069082..5069531 (-) | 450 | NP_253215.1 | type 4 fimbrial protein PilA | Machinery gene |
| PA4526 | pilB | 5069763..5071463 (+) | 1701 | NP_253216.1 | type 4 fimbrial biogenesis protein PilB | Machinery gene |
| PA4528 | pilD | 5072695..5073567 (+) | 873 | NP_253218.1 | type 4 prepilin peptidase PilD | Machinery gene |
| PA4529 | coaE | 5073564..5074175 (+) | 612 | NP_253219.1 | dephospho-CoA kinase | - |
| PA4530 | - | 5074172..5074372 (+) | 201 | NP_253220.1 | zinc-binding protein | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 15511.78 Da Isoelectric Point: 6.2905
>NTDB_id=20665 PA4525 NP_253215.1 5069082..5069531(-) (pilA) [Pseudomonas aeruginosa PAO1]
MKAQKGFTLIELMIVVAIIGILAAIAIPQYQNYVARSEGASALATINPLKTTVEESLSRGIAGSKIKIGTTASTATETYV
GVEPDANKLGVIAVAIEDSGAGDITFTFQTGTSSPKNATKVITLNRTADGVWACKSTQDPMFTPKGCDN
MKAQKGFTLIELMIVVAIIGILAAIAIPQYQNYVARSEGASALATINPLKTTVEESLSRGIAGSKIKIGTTASTATETYV
GVEPDANKLGVIAVAIEDSGAGDITFTFQTGTSSPKNATKVITLNRTADGVWACKSTQDPMFTPKGCDN
Nucleotide
Download Length: 450 bp
>NTDB_id=20665 PA4525 NP_253215.1 5069082..5069531(-) (pilA) [Pseudomonas aeruginosa PAO1]
ATGAAAGCTCAAAAAGGCTTTACCTTGATCGAACTGATGATCGTGGTTGCGATCATCGGTATCCTGGCGGCAATTGCCAT
TCCCCAGTATCAGAACTATGTTGCGCGTTCGGAAGGTGCTTCGGCGCTGGCGACGATCAACCCGCTGAAGACCACTGTTG
AAGAGTCGCTGTCGCGTGGAATTGCTGGTAGCAAAATTAAAATTGGTACTACTGCTTCTACTGCGACCGAAACATATGTC
GGCGTCGAGCCGGATGCCAACAAGTTGGGTGTAATTGCTGTAGCAATCGAAGATAGTGGTGCGGGTGATATTACCTTTAC
CTTCCAGACTGGTACCTCTAGTCCCAAGAATGCTACTAAAGTTATCACTCTGAACCGTACTGCGGATGGGGTCTGGGCTT
GTAAATCTACCCAGGATCCGATGTTCACTCCGAAAGGTTGTGATAACTAA
ATGAAAGCTCAAAAAGGCTTTACCTTGATCGAACTGATGATCGTGGTTGCGATCATCGGTATCCTGGCGGCAATTGCCAT
TCCCCAGTATCAGAACTATGTTGCGCGTTCGGAAGGTGCTTCGGCGCTGGCGACGATCAACCCGCTGAAGACCACTGTTG
AAGAGTCGCTGTCGCGTGGAATTGCTGGTAGCAAAATTAAAATTGGTACTACTGCTTCTACTGCGACCGAAACATATGTC
GGCGTCGAGCCGGATGCCAACAAGTTGGGTGTAATTGCTGTAGCAATCGAAGATAGTGGTGCGGGTGATATTACCTTTAC
CTTCCAGACTGGTACCTCTAGTCCCAAGAATGCTACTAAAGTTATCACTCTGAACCGTACTGCGGATGGGGTCTGGGCTT
GTAAATCTACCCAGGATCCGATGTTCACTCCGAAAGGTTGTGATAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Pseudomonas aeruginosa PAK |
67.785 |
100 |
0.678 |
| pilA | Acinetobacter baumannii strain A118 |
48 |
100 |
0.483 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
48.322 |
100 |
0.483 |
| pilA | Vibrio cholerae strain A1552 |
48.322 |
100 |
0.483 |
| pilA | Vibrio cholerae C6706 |
48.322 |
100 |
0.483 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
45.638 |
100 |
0.456 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
44.898 |
98.658 |
0.443 |
| comP | Acinetobacter baylyi ADP1 |
41.83 |
100 |
0.43 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
44.056 |
95.973 |
0.423 |
| pilA2 | Legionella pneumophila str. Paris |
38.776 |
98.658 |
0.383 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
38.095 |
98.658 |
0.376 |