Detailed information NTG0201597

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: AB478_RS08000
• Genome accession: NZ_CP017679
• Coordinates: 1599205..1599516 (-)
• Length: 103 a.a.
• NCBI ID: WP_000472256.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain CFSAN007883
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1594205..1604516

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB478_RS07965 (AB478_07765)	gcvPA	1594707..1596053 (-)	1347	WP_000019687.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
AB478_RS07970 (AB478_07770)	gcvT	1596073..1597164 (-)	1092	WP_000093349.1	glycine cleavage system aminomethyltransferase GcvT	-
AB478_RS07975 (AB478_07775)	-	1597323..1597847 (-)	525	WP_001015116.1	shikimate kinase	-
AB478_RS07980 (AB478_07780)	-	1597837..1597983 (-)	147	WP_001789879.1	hypothetical protein	-
AB478_RS07985 (AB478_07785)	comGF	1598080..1598577 (-)	498	WP_001838632.1	competence type IV pilus minor pilin ComGF	Machinery gene
AB478_RS07990 (AB478_07790)	comGE	1598495..1598794 (-)	300	WP_000844413.1	hypothetical protein	Machinery gene
AB478_RS07995 (AB478_07795)	comGD	1598781..1599227 (-)	447	WP_001796473.1	competence type IV pilus minor pilin ComGD	Machinery gene
AB478_RS08000 (AB478_07800)	comGC	1599205..1599516 (-)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
AB478_RS08005 (AB478_07805)	comGB	1599530..1600600 (-)	1071	WP_000776407.1	competence type IV pilus assembly protein ComGB	Machinery gene
AB478_RS08010 (AB478_07810)	comGA	1600572..1601546 (-)	975	WP_000697218.1	competence type IV pilus ATPase ComGA	Machinery gene
AB478_RS08015 (AB478_07815)	-	1601598..1602221 (-)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
AB478_RS08020 (AB478_07820)	-	1602218..1602547 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
AB478_RS08025 (AB478_07825)	-	1602547..1603533 (-)	987	WP_000161315.1	ROK family glucokinase	-
AB478_RS08030 (AB478_07830)	-	1603530..1603733 (-)	204	WP_000087561.1	YqgQ family protein	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11315.36 Da
• Isoelectric Point: 8.5268

>NTDB_id=201597 AB478_RS08000 WP_000472256.1 1599205..1599516(-) (comGC) [Staphylococcus aureus strain CFSAN007883]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=201597 AB478_RS08000 WP_000472256.1 1599205..1599516(-) (comGC) [Staphylococcus aureus strain CFSAN007883]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	100	100	1
comGC	Staphylococcus aureus N315	100	100	1
comGC/cglC	Streptococcus pneumoniae TIGR4	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae Rx1	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae D39	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae R6	46.078	99.029	0.456
comGC/cglC	Streptococcus mitis SK321	51.163	83.495	0.427
comGC/cglC	Streptococcus mitis NCTC 12261	51.163	83.495	0.427
comYC	Streptococcus gordonii str. Challis substr. CH1	42.857	95.146	0.408
comYC	Streptococcus suis isolate S10	50	75.728	0.379
comGC	Bacillus subtilis subsp. subtilis str. 168	41.758	88.35	0.369
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	79.612	0.369