Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | AYR68_RS16495 | Genome accession | NZ_CP014539 |
| Coordinates | 3462435..3462908 (-) | Length | 157 a.a. |
| NCBI ID | WP_001214061.1 | Uniprot ID | A0A219CC01 |
| Organism | Acinetobacter baumannii strain XH859 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3457435..3467908
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYR68_RS16480 (AYR68_16480) | pilX | 3460064..3460882 (-) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| AYR68_RS16485 (AYR68_16485) | pilW | 3460879..3461880 (-) | 1002 | WP_000079200.1 | PilW family protein | Machinery gene |
| AYR68_RS16490 (AYR68_16490) | pilV | 3461881..3462441 (-) | 561 | WP_085916952.1 | type IV pilus modification protein PilV | Machinery gene |
| AYR68_RS16495 (AYR68_16495) | fimU | 3462435..3462908 (-) | 474 | WP_001214061.1 | pilus assembly FimT family protein | Machinery gene |
| AYR68_RS16500 (AYR68_16500) | ispH | 3463078..3464028 (-) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| AYR68_RS16505 (AYR68_16505) | gmk | 3464151..3464780 (+) | 630 | WP_000015937.1 | guanylate kinase | - |
| AYR68_RS16510 (AYR68_16510) | rpoZ | 3464853..3465131 (+) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| AYR68_RS19640 | - | 3465170..3465299 (+) | 130 | Protein_3243 | hypothetical protein | - |
| AYR68_RS16515 (AYR68_16515) | - | 3465339..3467444 (+) | 2106 | WP_001117590.1 | RelA/SpoT family protein | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16836.40 Da Isoelectric Point: 8.5355
>NTDB_id=172267 AYR68_RS16495 WP_001214061.1 3462435..3462908(-) (fimU) [Acinetobacter baumannii strain XH859]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILSKLGTLVFKAEENC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILSKLGTLVFKAEENC
Nucleotide
Download Length: 474 bp
>NTDB_id=172267 AYR68_RS16495 WP_001214061.1 3462435..3462908(-) (fimU) [Acinetobacter baumannii strain XH859]
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGTCCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGTCCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
98.726 |
100 |
0.987 |